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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1
TraesCS6A01G146200.3
TraesCS6A01G251400.1
TraesCS6A01G274500.1
TraesCS6B01G174400.1
TraesCS6B01G273900.1
TraesCS6B01G302000.1
TraesCS6D01G135500.3
TraesCS6D01G233200.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G45210.1 TraesCS6A01G274500.1 AT3G27960.1 21798944
AT3G45210.1 TraesCS6B01G302000.1 AT3G27960.1 21798944
AT3G45210.1 TraesCS6D01G254800.1 AT3G27960.1 21798944
AT3G45210.1 TraesCS6A01G251400.1 AT3G48150.1 21798944
AT3G45210.1 TraesCS6B01G273900.1 AT3G48150.1 21798944
AT3G45210.1 TraesCS6D01G233200.1 AT3G48150.1 21798944
AT5G03230.1 TraesCS1A01G427400.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS1B01G462300.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS1D01G437100.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3A01G143000.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3A01G221800.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3B01G162100.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3B01G251600.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3D01G144600.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3D01G231300.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS6A01G146200.3 AT4G31920.1 18642946
AT5G03230.1 TraesCS6B01G174400.1 AT4G31920.1 18642946
AT5G03230.1 TraesCS6D01G135500.3 AT4G31920.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G212800.1 Wheat cytosol 94.89 96.53
TraesCS6B01G258900.1 Wheat nucleus 92.61 94.22
HORVU0Hr1G016350.1 Barley cytosol, mitochondrion, nucleus, plastid 92.05 91.01
Os02t0629000-01 Rice mitochondrion 64.2 66.47
Zm00001d017287_P001 Maize cytosol 56.82 58.82
TraesCS2A01G380100.1 Wheat mitochondrion 54.55 53.93
GSMUA_AchrUn_... Banana mitochondrion, nucleus 42.61 45.73
KRH22888 Soybean cytosol, mitochondrion, nucleus 36.36 41.56
VIT_06s0004g02830.t01 Wine grape cytosol 36.36 38.32
KRH26408 Soybean cytosol 30.68 36.24
Solyc06g075170.1.1 Tomato nucleus 33.52 36.2
PGSC0003DMT400062500 Potato nucleus 34.66 35.67
PGSC0003DMT400045373 Potato cytosol 29.55 35.37
TraesCS1A01G157900.1 Wheat mitochondrion 36.36 35.36
KRH29916 Soybean mitochondrion 33.52 34.5
AT5G60680.1 Thale cress nucleus 31.25 33.74
VIT_08s0040g01860.t01 Wine grape cytosol 31.25 33.54
PGSC0003DMT400020798 Potato plastid 32.39 33.53
KRH25013 Soybean mitochondrion 32.39 33.53
Solyc11g069450.1.1 Tomato cytosol 32.95 33.53
Solyc10g086110.1.1 Tomato cytosol 29.55 32.91
KRH19865 Soybean mitochondrion 33.52 32.78
AT5G03230.1 Thale cress nucleus 30.68 32.53
Solyc09g007790.1.1 Tomato cytosol 28.98 32.28
KRH67690 Soybean cytosol 30.11 31.93
KRG95986 Soybean nucleus 26.7 30.92
CDY65979 Canola nucleus 27.84 30.82
Bra020237.1-P Field mustard nucleus 28.98 30.72
PGSC0003DMT400055482 Potato cytosol 27.84 30.62
Bra002459.1-P Field mustard nucleus 27.84 30.62
AT2G28400.1 Thale cress mitochondrion 27.84 30.25
CDY62461 Canola nucleus 26.7 29.75
AT3G45210.1 Thale cress nucleus 25.0 29.73
CDY10396 Canola nucleus 29.55 29.55
CDX70321 Canola nucleus 29.55 29.55
CDY11244 Canola cytosol 29.55 29.21
Bra005738.1-P Field mustard cytosol 29.55 29.21
CDX80857 Canola cytosol 29.55 29.05
Bra009543.1-P Field mustard nucleus 28.98 28.98
KRH32477 Soybean cytosol 30.68 28.72
CDX77180 Canola nucleus 26.7 28.48
TraesCS5A01G127300.1 Wheat cytosol 24.43 27.39
TraesCS2A01G222500.1 Wheat cytosol 24.43 25.44
TraesCS2A01G391200.1 Wheat nucleus 26.14 22.89
TraesCS5A01G539400.1 Wheat cytosol 26.7 22.82
TraesCS2A01G295700.1 Wheat nucleus 26.7 19.92
TraesCS2A01G256200.1 Wheat mitochondrion, nucleus 20.45 19.78
TraesCS3A01G375300.1 Wheat mitochondrion, plastid 25.0 17.89
Bra035703.1-P Field mustard cytosol 25.0 17.89
Protein Annotations
EnsemblPlants:TraesCS6A01G222200.1EnsemblPlantsGene:TraesCS6A01G222200InterPro:Senescence_reg_S40PANTHER:PTHR33083PANTHER:PTHR33083:SF17PFAM:PF04520
SEG:segMapMan:35.2::::
Description
No Description!
Coordinates
chr6A:+:415098272..415098802
Molecular Weight (calculated)
18626.6 Da
IEP (calculated)
6.019
GRAVY (calculated)
-0.577
Length
176 amino acids
Sequence
(BLAST)
001: MARSTRSVAT ERAYHHFAPA STRGLMGYPA TAGGPVTADE FDESDVWGSF NPGEEAEQPA RSGAELPRVR AVPVARPGRK TKPVDRAGGG GAAHGSLPVA
101: IPDWSKILGG EYQGHQAGDW ELDDADDEDV EGAPVVPPHE LASRRRAASL SVNDGMGVGR MLKVRDAVWK KTGFQA
Best Arabidopsis Sequence Match ( AT5G03230.1 )
(BLAST)
001: MASRKLFFVK PKYIYPEPKP EMSDENVFEF DESDIHNLGD HQLPNSFDAK RSISISRLRR KPTKTGDSGN REITKTGSLP VNIPDWSKIL KSEYRGHAIP
101: DDDSDDDDED DDDSNDGGRR MIPPHEYLAR RRGSSFTVHE GIGGTAKGRD LRRLRNAIWE KIGFQD
Arabidopsis Description
Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LYW2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.