CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32477	Soybean	cytosol	88.89	85.11
KRG95986	Soybean	nucleus	47.78	56.58
KRH67690	Soybean	cytosol	47.78	51.81
VIT_08s0040g01860.t01	Wine grape	cytosol	42.22	46.34
PGSC0003DMT400045373	Potato	cytosol	37.22	45.58
Solyc09g007790.1.1	Tomato	cytosol	40.0	45.57
PGSC0003DMT400055482	Potato	cytosol	40.0	45.0
KRH22888	Soybean	cytosol, mitochondrion, nucleus	38.33	44.81
KRH26408	Soybean	cytosol	35.0	42.28
GSMUA_Achr11P...	Banana	mitochondrion	32.22	40.56
Solyc10g086110.1.1	Tomato	cytosol	35.0	39.87
KRH29916	Soybean	mitochondrion	37.78	39.77
KRH25013	Soybean	mitochondrion	37.22	39.41
GSMUA_Achr8P18920_001	Banana	cytosol, mitochondrion	34.44	38.27
Os04t0520700-01	Rice	mitochondrion	34.44	35.63
Zm00001d025872_P001	Maize	mitochondrion	35.56	35.56
HORVU1Hr1G041890.1	Barley	mitochondrion	34.44	34.64
TraesCS2B01G397000.1	Wheat	mitochondrion	33.89	34.27
TraesCS1B01G174100.1	Wheat	mitochondrion	34.44	34.25
TraesCS1A01G157900.1	Wheat	mitochondrion	34.44	34.25
TraesCS1D01G155400.1	Wheat	mitochondrion	34.44	34.25
Zm00001d003009_P001	Maize	mitochondrion, nucleus	35.0	34.24
Zm00001d014007_P001	Maize	cytosol, plastid	33.89	34.08
TraesCS2D01G376300.1	Wheat	mitochondrion	33.33	33.9
TraesCS2A01G380100.1	Wheat	mitochondrion	33.33	33.71
TraesCS6D01G212800.1	Wheat	cytosol	32.22	33.53
TraesCS6A01G222200.1	Wheat	cytosol	32.78	33.52
HORVU0Hr1G016350.1	Barley	cytosol, mitochondrion, nucleus, plastid	32.78	33.15
TraesCS6B01G258900.1	Wheat	nucleus	31.67	32.95
Os02t0629000-01	Rice	mitochondrion	31.11	32.94
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	30.0	32.93
EER91475	Sorghum	mitochondrion	33.89	32.11
HORVU0Hr1G005210.2	Barley	cytosol, plastid	31.11	31.64
KXG26730	Sorghum	mitochondrion	33.33	31.41
KRH33098	Soybean	cytosol	21.67	30.0
Zm00001d017287_P001	Maize	cytosol	28.33	30.0
KRH14391	Soybean	nucleus	28.89	27.37
KRH20851	Soybean	nucleus	24.44	26.99
KRH73758	Soybean	nucleus	28.89	26.67
KRH51093	Soybean	nucleus	27.22	25.93
KRH11426	Soybean	mitochondrion	27.78	25.91
KRH20860	Soybean	mitochondrion	27.22	25.13
KRH02067	Soybean	nucleus	25.56	24.86
KRH46190	Soybean	cytosol	28.89	24.53
KRH02073	Soybean	nucleus	27.78	23.47
KRH51082	Soybean	nucleus	30.0	23.38
KRH67951	Soybean	cytosol, plastid	26.67	22.02
KRG98750	Soybean	nucleus	22.22	19.23
KRH30402	Soybean	nucleus	23.89	18.45
KRH26654	Soybean	cytosol	24.44	18.18
KRG96207	Soybean	plastid	26.11	17.67
KRH22667	Soybean	nucleus	23.33	17.07
KRH25262	Soybean	nucleus	22.78	16.94
Os10t0481000-00	Rice	mitochondrion	22.78	13.71

Protein Annotations

EMBL:ACUP02008210	EnsemblPlants:KRH19865	EnsemblPlantsGene:GLYMA_13G140200	EntrezGene:100790091	InterPro:Senescence_reg_S40	PANTHER:PTHR33083
PANTHER:PTHR33083:SF9	PFAM:PF04520	ProteinID:KRH19865	ProteinID:KRH19865.1	SEG:seg	UniParc:UPI0001B637BD
UniProt:A0A0R4J4V8	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:25278535..25279798

Molecular Weight (calculated)

20578.7 Da

IEP (calculated)

7.187

GRAVY (calculated)

-1.188

Length

180 amino acids

Sequence
(BLAST)

001: MASRRSFLSN PNRYIFPTTS DTHLSPSQEG KGMFELDEAE LWNNNHSSAT TDQSKKGLPS PGSRSVLKKA SRNNNNGWRG RITPASLPVN IPDWSKILKE
101: DYKEHPKWES EEEEEEEEED NNVRDEQNHG LRNIKVPPHE YLARTRGASL SVHEGIGRTL KGRDLRSVRN AIWKKVGFED

Best Arabidopsis Sequence Match ( AT5G03230.1 )
(BLAST)

001: MASRKLFFVK PKYIYPEPKP EMSDENVFEF DESDIHNLGD HQLPNSFDAK RSISISRLRR KPTKTGDSGN REITKTGSLP VNIPDWSKIL KSEYRGHAIP
101: DDDSDDDDED DDDSNDGGRR MIPPHEYLAR RRGSSFTVHE GIGGTAKGRD LRRLRNAIWE KIGFQD

Arabidopsis Description

Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LYW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.