CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96207	Soybean	plastid	87.61	71.8
Solyc10g083260.1.1	Tomato	nucleus	21.56	63.51
GSMUA_Achr6P06990_001	Banana	mitochondrion, nucleus	35.78	46.15
PGSC0003DMT400023089	Potato	cytosol	46.79	42.5
Solyc09g010140.1.1	Tomato	cytosol	46.33	42.08
KRH30402	Soybean	nucleus	43.58	40.77
PGSC0003DMT400072600	Potato	nucleus	44.04	39.83
KRH26654	Soybean	cytosol	41.28	37.19
KRH22667	Soybean	nucleus	41.74	36.99
KRH22888	Soybean	cytosol, mitochondrion, nucleus	25.69	36.36
EER94255	Sorghum	mitochondrion, nucleus	39.91	36.1
KRH33098	Soybean	cytosol	21.1	35.38
KRG95986	Soybean	nucleus	23.85	34.21
OQU81531	Sorghum	nucleus	38.99	33.73
KRH26408	Soybean	cytosol	22.94	33.56
TraesCS2B01G312200.1	Wheat	nucleus	36.24	33.47
KRH25262	Soybean	nucleus	37.16	33.47
Os04t0413900-01	Rice	nucleus	37.61	33.47
Zm00001d003775_P001	Maize	cytosol, mitochondrion, nucleus	37.61	33.06
TraesCS2D01G293600.1	Wheat	nucleus	36.24	32.92
Zm00001d032976_P001	Maize	mitochondrion, nucleus	38.07	32.81
KRH29916	Soybean	mitochondrion	25.69	32.75
TraesCS2A01G295700.1	Wheat	nucleus	34.86	32.2
KRH11426	Soybean	mitochondrion	28.44	32.12
KRH67690	Soybean	cytosol	24.31	31.93
KRH73758	Soybean	nucleus	27.98	31.28
KRH20860	Soybean	mitochondrion	27.98	31.28
KRH25013	Soybean	mitochondrion	23.85	30.59
KRH14391	Soybean	nucleus	26.61	30.53
KRH20851	Soybean	nucleus	21.1	28.22
KRH51093	Soybean	nucleus	24.31	28.04
KRH02067	Soybean	nucleus	23.39	27.57
KRH02073	Soybean	nucleus	26.61	27.23
KRH32477	Soybean	cytosol	23.39	27.13
KRH19865	Soybean	mitochondrion	22.02	26.67
KRH46190	Soybean	cytosol	25.69	26.42
KRH51082	Soybean	nucleus	26.15	24.68
KRG98750	Soybean	nucleus	20.18	21.15

Protein Annotations

EMBL:ACUP02002092	EnsemblPlants:KRH67951	EnsemblPlantsGene:GLYMA_03G197800	EntrezGene:100799522	InterPro:Senescence_reg_S40	PANTHER:PTHR33083
PANTHER:PTHR33083:SF42	PFAM:PF04520	ProteinID:KRH67951	ProteinID:KRH67951.1	SEG:seg	UniParc:UPI00023C2458
UniProt:I1JQ45	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:40709206..40710003

Molecular Weight (calculated)

23673.6 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.651

Length

218 amino acids

Sequence
(BLAST)

001: MDPTPSFHRR SSSSSSDRLL GPYPFSPSPS SAASSSAEEL NEAELFWATD SSESEPQRPT PPPKSRLRNF DRPVDSGILV VLRETESRGG LFRGKSPVPT
101: SSRMTIPSLP RPPAASPSAD YLAQSAPSRK FQQSAPVKVP ILLSASASRR KNADDFARVV DDDDDDEEML PPHEIVARGS GVSPKTTFSV LEGVGRTLKG
201: RDLRQVRNAV LRQTGFLD

Best Arabidopsis Sequence Match ( AT3G15040.1 )
(BLAST)

001: MNKNPRLDFS SPSSLATISD SADGELNEDD IFAIDISHAP PQARHSPVSS PAKQQTPARQ LQRSKSGLKN VEASGILAAL PESSGSSSYL SHVFHHKPAA
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID

Arabidopsis Description

At3g15040 [Source:UniProtKB/TrEMBL;Acc:Q9LKA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.