CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29916	Soybean	mitochondrion	88.24	87.72
KRH22888	Soybean	cytosol, mitochondrion, nucleus	55.88	61.69
KRH26408	Soybean	cytosol	52.35	59.73
Solyc06g075170.1.1	Tomato	nucleus	48.24	50.31
VIT_06s0004g02830.t01	Wine grape	cytosol	46.47	47.31
PGSC0003DMT400020798	Potato	plastid	47.06	47.06
PGSC0003DMT400062500	Potato	nucleus	47.06	46.78
Solyc11g069450.1.1	Tomato	cytosol	47.06	46.24
GSMUA_Achr11P...	Banana	mitochondrion	38.24	45.45
KRG95986	Soybean	nucleus	37.65	42.11
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	39.41	40.85
GSMUA_Achr8P18920_001	Banana	cytosol, mitochondrion	38.24	40.12
TraesCS2A01G380100.1	Wheat	mitochondrion	39.41	37.64
KRH32477	Soybean	cytosol	41.18	37.23
KRH19865	Soybean	mitochondrion	39.41	37.22
KRH67690	Soybean	cytosol	35.88	36.75
TraesCS2D01G376300.1	Wheat	mitochondrion	38.24	36.72
TraesCS2B01G397000.1	Wheat	mitochondrion	38.24	36.52
Os04t0520700-01	Rice	mitochondrion	37.06	36.21
HORVU0Hr1G005210.2	Barley	cytosol, plastid	37.06	35.59
HORVU1Hr1G041890.1	Barley	mitochondrion	36.47	34.64
TraesCS1D01G155400.1	Wheat	mitochondrion	36.47	34.25
TraesCS1B01G174100.1	Wheat	mitochondrion	36.47	34.25
TraesCS1A01G157900.1	Wheat	mitochondrion	36.47	34.25
Os02t0629000-01	Rice	mitochondrion	34.12	34.12
Zm00001d003009_P001	Maize	mitochondrion, nucleus	36.47	33.7
Zm00001d017287_P001	Maize	cytosol	33.53	33.53
TraesCS6D01G212800.1	Wheat	cytosol	34.12	33.53
Zm00001d014007_P001	Maize	cytosol, plastid	34.71	32.96
TraesCS6B01G258900.1	Wheat	nucleus	33.53	32.95
Zm00001d025872_P001	Maize	mitochondrion	34.71	32.78
EER91475	Sorghum	mitochondrion	36.47	32.63
HORVU0Hr1G016350.1	Barley	cytosol, mitochondrion, nucleus, plastid	34.12	32.58
TraesCS6A01G222200.1	Wheat	cytosol	33.53	32.39
KRH33098	Soybean	cytosol	24.71	32.31
KXG26730	Sorghum	mitochondrion	35.88	31.94
KRH20851	Soybean	nucleus	29.41	30.67
KRH14391	Soybean	nucleus	34.12	30.53
KRH73758	Soybean	nucleus	34.12	29.74
KRH51093	Soybean	nucleus	31.76	28.57
KRH11426	Soybean	mitochondrion	32.35	28.5
KRH20860	Soybean	mitochondrion	32.35	28.21
KRH02067	Soybean	nucleus	30.59	28.11
KRH02073	Soybean	nucleus	34.71	27.7
KRH46190	Soybean	cytosol	32.35	25.94
KRH51082	Soybean	nucleus	33.53	24.68
KRH67951	Soybean	cytosol, plastid	30.59	23.85
KRH22667	Soybean	nucleus	32.35	22.36
KRH26654	Soybean	cytosol	30.0	21.07
KRH30402	Soybean	nucleus	28.82	21.03
KRG98750	Soybean	nucleus	25.29	20.67
KRG96207	Soybean	plastid	30.0	19.17
KRH25262	Soybean	nucleus	25.88	18.18
Os10t0481000-00	Rice	mitochondrion	24.12	13.71

Protein Annotations

EMBL:ACUP02007196	EnsemblPlants:KRH25013	EnsemblPlantsGene:GLYMA_12G075600	EntrezGene:100812183	InterPro:Senescence_reg_S40	PANTHER:PTHR33083
PANTHER:PTHR33083:SF9	PFAM:PF04520	ProteinID:KRH25013	ProteinID:KRH25013.1	SEG:seg	UniParc:UPI0001B637BC
UniProt:A0A0R4J4I3	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:5776807..5778036

Molecular Weight (calculated)

19194.0 Da

IEP (calculated)

7.978

GRAVY (calculated)

-0.894

Length

170 amino acids

Sequence
(BLAST)

001: MLTIMASRKN HFTSRSHRFL PVASDIHDSV SLTMDLESAF EFDESEIYNS ARANNSFEFR RSLHGRGSNS SAKKKPSSSS GDPASVPVNI PDWSKILGDE
101: YRRKNNFHSD NDDDNESYND ERSGRVPPHE FLARNRVASF SVHEGVGRTL KGRDLSTLRN AIWAKTGFQD

Best Arabidopsis Sequence Match ( AT3G45210.1 )
(BLAST)

001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD

Arabidopsis Description

AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.