CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67951	Soybean	cytosol, plastid	71.8	87.61
Solyc10g083260.1.1	Tomato	nucleus	17.67	63.51
GSMUA_Achr6P06990_001	Banana	mitochondrion, nucleus	27.44	43.2
PGSC0003DMT400023089	Potato	cytosol	36.84	40.83
Solyc09g010140.1.1	Tomato	cytosol	36.84	40.83
KRH30402	Soybean	nucleus	33.46	38.2
PGSC0003DMT400072600	Potato	nucleus	34.59	38.17
KRH26654	Soybean	cytosol	33.46	36.78
KRH22667	Soybean	nucleus	33.83	36.59
KRH22888	Soybean	cytosol, mitochondrion, nucleus	20.68	35.71
EER94255	Sorghum	mitochondrion, nucleus	31.95	35.27
KRH33098	Soybean	cytosol	16.92	34.62
OQU81531	Sorghum	nucleus	31.95	33.73
Zm00001d003775_P001	Maize	cytosol, mitochondrion, nucleus	31.2	33.47
Os04t0413900-01	Rice	nucleus	30.45	33.06
TraesCS2B01G312200.1	Wheat	nucleus	29.32	33.05
KRG95986	Soybean	nucleus	18.8	32.89
KRH26408	Soybean	cytosol	18.42	32.89
TraesCS2D01G293600.1	Wheat	nucleus	29.32	32.5
TraesCS2A01G295700.1	Wheat	nucleus	28.57	32.2
KRH11426	Soybean	mitochondrion	23.31	32.12
Zm00001d032976_P001	Maize	mitochondrion, nucleus	30.45	32.02
KRH29916	Soybean	mitochondrion	20.3	31.58
KRH25262	Soybean	nucleus	28.57	31.41
KRH20860	Soybean	mitochondrion	22.93	31.28
KRH67690	Soybean	cytosol	19.17	30.72
KRH25013	Soybean	mitochondrion	19.17	30.0
KRH73758	Soybean	nucleus	21.43	29.23
KRH14391	Soybean	nucleus	20.68	28.95
KRH02073	Soybean	nucleus	22.56	28.17
KRH20851	Soybean	nucleus	16.92	27.61
KRH02067	Soybean	nucleus	18.8	27.03
KRH32477	Soybean	cytosol	18.8	26.6
KRH51093	Soybean	nucleus	18.8	26.45
KRH19865	Soybean	mitochondrion	17.67	26.11
KRH51082	Soybean	nucleus	22.18	25.54
KRH46190	Soybean	cytosol	19.92	25.0
KRG98750	Soybean	nucleus	15.04	19.23

Protein Annotations

EMBL:ACUP02012147	EnsemblPlants:KRG96207	EnsemblPlantsGene:GLYMA_19G195700	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF42
PFAM:PF04520	ProteinID:KRG96207	ProteinID:KRG96207.1	SEG:seg	UniParc:UPI00023DD7D6	UniProt:I1NAQ4
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:45277653..45279010

Molecular Weight (calculated)

28965.5 Da

IEP (calculated)

9.110

GRAVY (calculated)

-0.385

Length

266 amino acids

Sequence
(BLAST)

001: MGKGGPHGNR DSQFLILFGA TLRPSATSPG LRIHYSPYLI FLSLHSLLFP IPTPTNQMDP TLSFHRRSSS DLLLGPFPFC PSPSSSAEEL NEAELFWATD
101: SSESEPQRPA PSPKPHLRNF DRPVDSGILV LLTEPDSRGG LLRGKSPVPT SSRMTIPSLP RPPAPPAADY LAQSAPFRKF QQSAPVKVPI LLSAGAARRK
201: NADDFARVVD DDDDEEMLPP HEIVARGSGV SPKTTFSVLE GVGRTLKGRD LRQVRNAVLR QTGFLD

Best Arabidopsis Sequence Match ( AT3G15040.1 )
(BLAST)

001: MNKNPRLDFS SPSSLATISD SADGELNEDD IFAIDISHAP PQARHSPVSS PAKQQTPARQ LQRSKSGLKN VEASGILAAL PESSGSSSYL SHVFHHKPAA
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID

Arabidopsis Description

At3g15040 [Source:UniProtKB/TrEMBL;Acc:Q9LKA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.