Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14391 | Soybean | nucleus | 88.21 | 90.53 |
| KRH33098 | Soybean | cytosol | 53.33 | 80.0 |
| KRH46190 | Soybean | cytosol | 71.28 | 65.57 |
| KRG98750 | Soybean | nucleus | 60.51 | 56.73 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 34.36 | 49.63 |
| KRH20851 | Soybean | nucleus | 37.44 | 44.79 |
| CDY46674 | Canola | nucleus | 34.36 | 44.67 |
| AT4G26950.1 | Thale cress | nucleus | 32.31 | 43.75 |
| Bra019080.1-P | Field mustard | nucleus | 33.85 | 43.71 |
| CDX92790 | Canola | nucleus | 33.33 | 43.62 |
| VIT_19s0090g00510.t01 | Wine grape | plastid | 51.28 | 43.1 |
| KRH51093 | Soybean | nucleus | 39.49 | 40.74 |
| KRH02067 | Soybean | nucleus | 37.44 | 39.46 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 28.21 | 35.71 |
| KRH29916 | Soybean | mitochondrion | 30.77 | 35.09 |
| KRH25013 | Soybean | mitochondrion | 29.74 | 34.12 |
| KRH26408 | Soybean | cytosol | 25.13 | 32.89 |
| KRG95986 | Soybean | nucleus | 24.62 | 31.58 |
| KRH67690 | Soybean | cytosol | 25.64 | 30.12 |
| KRH19865 | Soybean | mitochondrion | 26.67 | 28.89 |
| KRH32477 | Soybean | cytosol | 27.18 | 28.19 |
| KRH67951 | Soybean | cytosol, plastid | 31.28 | 27.98 |
| KRH11426 | Soybean | mitochondrion | 27.18 | 27.46 |
| KRH20860 | Soybean | mitochondrion | 26.15 | 26.15 |
| KRH02073 | Soybean | nucleus | 25.64 | 23.47 |
| KRH51082 | Soybean | nucleus | 26.15 | 22.08 |
| KRG96207 | Soybean | plastid | 29.23 | 21.43 |
| KRH30402 | Soybean | nucleus | 24.62 | 20.6 |
| KRH22667 | Soybean | nucleus | 25.64 | 20.33 |
| KRH26654 | Soybean | cytosol | 24.62 | 19.83 |
| KRH25262 | Soybean | nucleus | 23.08 | 18.59 |
Protein Annotations
| EMBL:ACUP02001288 | EMBL:BT098193 | EnsemblPlants:KRH73758 | EnsemblPlantsGene:GLYMA_02G291700 | EntrezGene:100796494 | InterPro:Senescence_reg_S40 |
| PANTHER:PTHR33083 | PANTHER:PTHR33083:SF4 | PFAM:PF04520 | ProteinID:KRH73758 | ProteinID:KRH73758.1 | SEG:seg |
| UniParc:UPI0001B16C59 | UniProt:C6TKI1 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:47102438..47103989
Molecular Weight (calculated)
21570.5 Da
IEP (calculated)
6.565
GRAVY (calculated)
-1.035
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKYSLGRQ HSGIWKSLRD GEFDEEEVWD VFKNRSDYGS SSSGVRKFKD KGKSSSVPAR PSSARMIPRS SNSSNNSSAS SSNEAKVLQQ SAPVNIPDWS
101: KIYRTKTPKN SVSRFDDDYD GDGAANYGGD SDEDGEENDE SDSKLPPHEF IARRLARSRI SSFSVLEGAG RTLKGRDLSK VRNDVLSKTG FLESL
101: KIYRTKTPKN SVSRFDDDYD GDGAANYGGD SDEDGEENDE SDSKLPPHEF IARRLARSRI SSFSVLEGAG RTLKGRDLSK VRNDVLSKTG FLESL
001: MEKSYMKHEL WGDGDFQEDD VWDVLDGYQS PFMISSNHTT KPSFSTQTLL PSEPRMIPER QRTEGMAPMR QQSVPVNVPD WSMVQRKKTK KVVDDENVSP
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
Arabidopsis Description
At4g26950 [Source:UniProtKB/TrEMBL;Acc:Q9SZ34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.