Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26408 | Soybean | cytosol | 87.01 | 89.93 |
| Solyc06g075170.1.1 | Tomato | nucleus | 59.74 | 56.44 |
| KRH25013 | Soybean | mitochondrion | 61.69 | 55.88 |
| KRH29916 | Soybean | mitochondrion | 61.04 | 54.97 |
| Bra020237.1-P | Field mustard | nucleus | 59.09 | 54.82 |
| CDY65979 | Canola | nucleus | 56.49 | 54.72 |
| AT5G60680.1 | Thale cress | nucleus | 57.14 | 53.99 |
| Bra002459.1-P | Field mustard | nucleus | 55.84 | 53.75 |
| PGSC0003DMT400062500 | Potato | nucleus | 59.09 | 53.22 |
| AT3G45210.1 | Thale cress | nucleus | 50.65 | 52.7 |
| PGSC0003DMT400020798 | Potato | plastid | 57.79 | 52.35 |
| Solyc11g069450.1.1 | Tomato | cytosol | 57.14 | 50.87 |
| GSMUA_Achr11P... | Banana | mitochondrion | 44.16 | 47.55 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 48.05 | 45.68 |
| AT2G28400.1 | Thale cress | mitochondrion | 42.21 | 40.12 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 42.21 | 39.63 |
| CDY62461 | Canola | nucleus | 40.26 | 39.24 |
| Os04t0520700-01 | Rice | mitochondrion | 44.16 | 39.08 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 44.81 | 38.76 |
| Zm00001d025872_P001 | Maize | mitochondrion | 44.81 | 38.33 |
| KRH19865 | Soybean | mitochondrion | 44.81 | 38.33 |
| CDX77180 | Canola | nucleus | 40.91 | 38.18 |
| KRG95986 | Soybean | nucleus | 37.66 | 38.16 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 43.51 | 37.85 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 43.51 | 37.64 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 42.21 | 37.57 |
| KRH32477 | Soybean | cytosol | 45.45 | 37.23 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 42.86 | 37.08 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 41.56 | 36.99 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 42.86 | 36.87 |
| KRH67690 | Soybean | cytosol | 39.61 | 36.75 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 42.21 | 36.72 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 42.86 | 36.46 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 42.86 | 36.46 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 42.86 | 36.46 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 43.51 | 36.41 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 41.56 | 36.36 |
| KXG26730 | Sorghum | mitochondrion | 44.16 | 35.6 |
| Os02t0629000-01 | Rice | mitochondrion | 38.96 | 35.29 |
| Zm00001d017287_P001 | Maize | cytosol | 38.31 | 34.71 |
| KRH33098 | Soybean | cytosol | 29.22 | 34.62 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 39.61 | 34.08 |
| EER91475 | Sorghum | mitochondrion | 40.91 | 33.16 |
| KRH20851 | Soybean | nucleus | 33.12 | 31.29 |
| KRH20860 | Soybean | mitochondrion | 38.31 | 30.26 |
| KRH11426 | Soybean | mitochondrion | 37.66 | 30.05 |
| KRH51093 | Soybean | nucleus | 36.36 | 29.63 |
| KRH02067 | Soybean | nucleus | 35.06 | 29.19 |
| KRH14391 | Soybean | nucleus | 35.71 | 28.95 |
| KRH73758 | Soybean | nucleus | 35.71 | 28.21 |
| KRH02073 | Soybean | nucleus | 38.96 | 28.17 |
| KRH51082 | Soybean | nucleus | 39.61 | 26.41 |
| KRH46190 | Soybean | cytosol | 35.71 | 25.94 |
| KRH67951 | Soybean | cytosol, plastid | 36.36 | 25.69 |
| Bra035703.1-P | Field mustard | cytosol | 37.66 | 23.58 |
| KRH30402 | Soybean | nucleus | 34.42 | 22.75 |
| KRH22667 | Soybean | nucleus | 35.71 | 22.36 |
| KRH26654 | Soybean | cytosol | 34.42 | 21.9 |
| KRG96207 | Soybean | plastid | 35.71 | 20.68 |
| KRH25262 | Soybean | nucleus | 31.82 | 20.25 |
| KRG98750 | Soybean | nucleus | 27.27 | 20.19 |
| Os10t0481000-00 | Rice | mitochondrion | 30.52 | 15.72 |
Protein Annotations
| EMBL:ACUP02008440 | EnsemblPlants:KRH22888 | EnsemblPlantsGene:GLYMA_13G325800 | EntrezGene:100814909 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF9 | PFAM:PF04520 | ProteinID:KRH22888 | ProteinID:KRH22888.1 | SEG:seg | UniParc:UPI0001B637BB |
| UniProt:A0A0R4J538 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:42099282..42100520
Molecular Weight (calculated)
17333.8 Da
IEP (calculated)
6.975
GRAVY (calculated)
-0.836
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNIRRATY RFLPAMDTDS FSDSTFEFHE SDLYNSARAN SPELAKSVRS SRFHNYSSSS AARVGAPASL PVNVPDWSKI LGDEYGRNQR RNYDDDDEAR
101: SDEEDGVGRV PPHEFLARTR IASFSVHEGV GRTLKGRDLS RVRNAIWAKT GFQD
101: SDEEDGVGRV PPHEFLARTR IASFSVHEGV GRTLKGRDLS RVRNAIWAKT GFQD
001: MATGKSYYAR PSYRFLGTDQ PSYFTASDSG LEFDESDLFN PIHSDSPDFC RKISSSVRSG KKSSNRPSAA SSAAAASSLP VNVPDWSKIL RGEYRDNRRR
101: SIEDNDDDDD DNEDGGDWLP PHEFLAKTRM ASFSVHEGVG RTLKGRDLSR VRNAIFEKFG FQD
101: SIEDNDDDDD DNEDGGDWLP PHEFLAKTRM ASFSVHEGVG RTLKGRDLSR VRNAIFEKFG FQD
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FF51]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.