Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62461 | Canola | nucleus | 94.55 | 98.73 |
| AT2G28400.1 | Thale cress | mitochondrion | 82.42 | 83.95 |
| Bra035703.1-P | Field mustard | cytosol | 87.27 | 58.54 |
| CDY65979 | Canola | nucleus | 40.0 | 41.51 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 38.18 | 40.91 |
| KRH26408 | Soybean | cytosol | 36.36 | 40.27 |
| PGSC0003DMT400020798 | Potato | plastid | 40.61 | 39.41 |
| Solyc11g069450.1.1 | Tomato | cytosol | 40.61 | 38.73 |
| Solyc06g075170.1.1 | Tomato | nucleus | 38.18 | 38.65 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.12 | 37.06 |
| PGSC0003DMT400062500 | Potato | nucleus | 37.58 | 36.26 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 37.58 | 34.25 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 37.58 | 34.25 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 36.97 | 34.08 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 33.33 | 33.95 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 36.97 | 33.7 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.33 | 33.54 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 35.76 | 32.96 |
| Zm00001d025872_P001 | Maize | mitochondrion | 35.76 | 32.78 |
| Os04t0520700-01 | Rice | mitochondrion | 34.55 | 32.76 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 33.94 | 31.64 |
| CDX82889 | Canola | nucleus | 29.09 | 31.58 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 33.94 | 31.46 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 33.94 | 31.46 |
| CDX98721 | Canola | nucleus | 29.7 | 31.21 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 34.55 | 30.98 |
| CDX79115 | Canola | nucleus | 28.48 | 30.72 |
| CDX94069 | Canola | nucleus | 29.09 | 30.57 |
| EER91475 | Sorghum | mitochondrion | 35.15 | 30.53 |
| CDX94568 | Canola | nucleus | 27.27 | 30.0 |
| CDY29096 | Canola | nucleus | 27.27 | 30.0 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 32.12 | 29.94 |
| Os02t0629000-01 | Rice | mitochondrion | 30.3 | 29.41 |
| CDY16655 | Canola | nucleus | 29.7 | 29.34 |
| KXG26730 | Sorghum | mitochondrion | 33.94 | 29.32 |
| Zm00001d017287_P001 | Maize | cytosol | 29.7 | 28.82 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 29.7 | 27.53 |
| CDX70321 | Canola | nucleus | 29.09 | 27.27 |
| CDY10396 | Canola | nucleus | 29.09 | 27.27 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 28.48 | 27.17 |
| CDY11244 | Canola | cytosol | 29.09 | 26.97 |
| CDX80857 | Canola | cytosol | 29.09 | 26.82 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 28.48 | 26.7 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 27.27 | 26.01 |
| CDY46674 | Canola | nucleus | 23.03 | 25.33 |
| CDX82885 | Canola | nucleus | 26.06 | 24.86 |
| CDX79110 | Canola | nucleus | 26.06 | 24.86 |
| CDX92790 | Canola | nucleus | 22.42 | 24.83 |
| CDX97628 | Canola | nucleus | 31.52 | 24.07 |
| CDY20098 | Canola | nucleus | 29.09 | 23.3 |
| CDY12918 | Canola | cytosol | 27.88 | 23.23 |
| CDY68595 | Canola | nucleus | 30.3 | 23.15 |
| CDX82452 | Canola | nucleus | 31.52 | 23.11 |
| CDY19509 | Canola | cytosol | 27.27 | 22.73 |
| CDY32323 | Canola | nucleus | 28.48 | 22.71 |
| CDX97979 | Canola | mitochondrion | 27.88 | 22.55 |
| CDY49797 | Canola | mitochondrion | 27.88 | 22.44 |
| CDY34631 | Canola | nucleus | 26.67 | 21.89 |
| CDX75803 | Canola | nucleus | 30.91 | 21.61 |
| Os10t0481000-00 | Rice | mitochondrion | 27.88 | 15.38 |
Protein Annotations
| EnsemblPlants:CDX77180 | EnsemblPlantsGene:GSBRNA2T00127815001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF9 | PFAM:PF04520 |
| ProteinID:CDX77180 | ProteinID:CDX77180.1 | UniParc:UPI0001B637FB | MapMan:35.2 | : | : |
Description
BnaC04g39750D
Coordinates
chrLK031809:-:1751627..1752314
Molecular Weight (calculated)
18194.9 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.754
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSKCYYPR PSHRFFSTDQ HVSSPSDFEL DEWDLFNTGS DSASGFTFSD LTITSDRTGA NRKPRGGSVS EKFAGSAASS LPVNVPDWSK ILGEESPRRQ
101: TSNEEYDGDE VAACGGETRR VPPHELLASR RMASFSVHEG AGRTLKGRDL SRVRNTIFKI RGIED
101: TSNEEYDGDE VAACGGETRR VPPHELLASR RMASFSVHEG AGRTLKGRDL SRVRNTIFKI RGIED
001: MATSKCYYPR PSHRFFTTDQ HVTATSDFEL DEWDLFNTGS DSSSSFSFSD LTITSGRTGT NRQIHGGSDS GKAASSLPVN VPDWSKILGD ESRRQRKISN
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
Arabidopsis Description
Uncharacterized protein At2g28400 [Source:UniProtKB/TrEMBL;Acc:Q9SKN0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.