Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027071.1-P | Field mustard | cytosol | 97.98 | 97.98 |
| CDY12918 | Canola | cytosol | 97.47 | 97.47 |
| AT1G61930.1 | Thale cress | cytosol | 80.81 | 78.82 |
| CDX97979 | Canola | mitochondrion | 66.67 | 64.71 |
| CDY49797 | Canola | mitochondrion | 66.16 | 63.9 |
| CDY34631 | Canola | nucleus | 63.64 | 62.69 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 46.97 | 44.93 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 45.45 | 43.69 |
| Solyc02g032800.1.1 | Tomato | nucleus | 46.97 | 43.26 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 43.43 | 43.22 |
| CDX82885 | Canola | nucleus | 36.87 | 42.2 |
| CDX79110 | Canola | nucleus | 36.36 | 41.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.35 | 38.46 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 16.67 | 38.37 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 35.35 | 38.25 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 33.84 | 37.64 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 33.33 | 37.5 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 33.84 | 37.22 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 33.84 | 36.81 |
| EER97815 | Sorghum | mitochondrion | 30.3 | 35.71 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.79 | 33.73 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 28.28 | 33.14 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 27.78 | 32.54 |
| CDY65979 | Canola | nucleus | 24.75 | 30.82 |
| CDY29096 | Canola | nucleus | 22.22 | 29.33 |
| CDX94568 | Canola | nucleus | 22.22 | 29.33 |
| CDX79115 | Canola | nucleus | 22.22 | 28.76 |
| CDX94069 | Canola | nucleus | 22.73 | 28.66 |
| CDX98721 | Canola | nucleus | 22.73 | 28.66 |
| Zm00001d006489_P001 | Maize | mitochondrion | 27.78 | 28.65 |
| Zm00001d021627_P001 | Maize | mitochondrion | 26.77 | 28.19 |
| CDY16655 | Canola | nucleus | 23.74 | 28.14 |
| CDY46674 | Canola | nucleus | 21.21 | 28.0 |
| CDY62461 | Canola | nucleus | 22.22 | 27.85 |
| EER99449 | Sorghum | mitochondrion | 27.27 | 27.84 |
| CDX82889 | Canola | nucleus | 21.21 | 27.63 |
| Os07t0516300-01 | Rice | mitochondrion | 27.27 | 27.55 |
| CDX92790 | Canola | nucleus | 20.71 | 27.52 |
| CDX77180 | Canola | nucleus | 22.73 | 27.27 |
| CDY11244 | Canola | cytosol | 23.74 | 26.4 |
| CDX80857 | Canola | cytosol | 23.23 | 25.7 |
| CDX70321 | Canola | nucleus | 22.73 | 25.57 |
| CDY10396 | Canola | nucleus | 22.73 | 25.57 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 21.72 | 25.15 |
| CDY32323 | Canola | nucleus | 24.75 | 23.67 |
| CDY20098 | Canola | nucleus | 24.24 | 23.3 |
| CDX97628 | Canola | nucleus | 24.24 | 22.22 |
| CDY68595 | Canola | nucleus | 23.74 | 21.76 |
| HORVU2Hr1G046550.2 | Barley | plastid | 22.73 | 21.74 |
| CDX82452 | Canola | nucleus | 23.74 | 20.89 |
| CDX75803 | Canola | nucleus | 24.24 | 20.34 |
Protein Annotations
| EnsemblPlants:CDY19509 | EnsemblPlantsGene:GSBRNA2T00009124001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 |
| ProteinID:CDY19509 | ProteinID:CDY19509.1 | SEG:seg | UniParc:UPI0004EB9C26 | UniProt:A0A078G207 | MapMan:35.2 |
Description
BnaC09g13940DBnaC09g13940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G207]
Coordinates
chrLK032097:+:137718..138314
Molecular Weight (calculated)
21639.0 Da
IEP (calculated)
4.936
GRAVY (calculated)
-0.707
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGRNPTTM NRSDRYLGSY SYGDSHGTSL TDELELAEED IWSPAVIHDT ETEDSYSGWN LSANSMKSGR VGGLSLTFKS SSNAPSSSPM LVQQIHGGVG
101: EGGEIMRNLA SSAPVNVPDW SEIYRVNLVE STHELDGDDE EEPGMMPPHE YLAKSQARRS RKMGGGGASM FEGVGRTLKG RELRRVRDAI WSQTGFYG
101: EGGEIMRNLA SSAPVNVPDW SEIYRVNLVE STHELDGDDE EEPGMMPPHE YLAKSQARRS RKMGGGGASM FEGVGRTLKG RELRRVRDAI WSQTGFYG
001: MAKGRKPTTM NRSDRYLGSY TYGDSHGNSV TDELELGEED IWSPAVIHDD TTENEESYGT WNLRATLGKN GRVGGLSLAF EGSLVAPPSS SPMIVQKIHG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
Arabidopsis Description
At1g61930 [Source:UniProtKB/TrEMBL;Acc:O80698]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.