Factsheet for HORVU2Hr1G064730.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G266500.1	Wheat	mitochondrion, nucleus	91.48	90.45
TraesCS2A01G256200.1	Wheat	mitochondrion, nucleus	92.61	89.56
TraesCS2B01G286300.1	Wheat	mitochondrion, nucleus	90.91	88.89
EER97815	Sorghum	mitochondrion	51.14	53.57
GSMUA_Achr7P00240_001	Banana	extracellular	22.16	45.35
KRH11426	Soybean	mitochondrion	43.18	39.38
VIT_10s0116g01810.t01	Wine grape	mitochondrion, nucleus	42.61	38.86
KRH20860	Soybean	mitochondrion	42.61	38.46
Bra013574.1-P	Field mustard	cytosol	36.93	37.57
CDX79110	Canola	nucleus	36.93	37.57
AT4G21930.1	Thale cress	cytosol	38.64	37.16
CDX82885	Canola	nucleus	36.36	36.99
VIT_10s0116g01820.t01	Wine grape	mitochondrion, nucleus	43.18	35.68
GSMUA_Achr4P33500_001	Banana	nucleus	36.93	35.52
GSMUA_AchrUn_...	Banana	nucleus	36.36	35.16
AT1G61930.1	Thale cress	cytosol	40.34	34.98
CDY12918	Canola	cytosol	38.64	34.34
PGSC0003DMT400032972	Potato	mitochondrion	38.64	34.17
AT1G11700.1	Thale cress	nucleus	38.64	33.83
KRH02073	Soybean	nucleus	40.91	33.8
Solyc02g080510.1.1	Tomato	mitochondrion	39.2	33.5
Bra027071.1-P	Field mustard	cytosol	37.5	33.33
CDX97979	Canola	mitochondrion	38.64	33.33
PGSC0003DMT400042431	Potato	mitochondrion, nucleus	39.2	33.33
CDY19509	Canola	cytosol	37.5	33.33
CDY49797	Canola	mitochondrion	38.64	33.17
Bra019837.1-P	Field mustard	mitochondrion	38.64	33.17
Solyc02g032800.1.1	Tomato	nucleus	40.34	33.02
CDY34631	Canola	nucleus	37.5	32.84
KRH51082	Soybean	nucleus	40.34	30.74
HORVU0Hr1G038250.1	Barley	cytosol	25.57	28.66
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	26.7	27.49
HORVU2Hr1G092750.1	Barley	cytosol, mitochondrion, nucleus, plastid	30.68	26.87
HORVU0Hr1G005210.2	Barley	cytosol, plastid	25.57	25.42
HORVU4Hr1G089030.1	Barley	cytosol	26.7	24.1
HORVU1Hr1G041890.1	Barley	mitochondrion	24.43	24.02
HORVU2Hr1G046550.2	Barley	plastid	27.27	23.19
HORVU3Hr1G083800.1	Barley	nucleus	26.7	21.86
HORVU0Hr1G016350.1	Barley	cytosol, mitochondrion, nucleus, plastid	20.45	20.22

Protein Annotations

EnsemblPlants:HORVU2Hr1G064730.1	EnsemblPlantsGene:HORVU2Hr1G064730	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF41	PFAM:PF04520
UniParc:UPI000294C254	UniProt:M0ZEJ8	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:440268421..440269804

Molecular Weight (calculated)

18802.8 Da

IEP (calculated)

7.709

GRAVY (calculated)

-0.649

Length

176 amino acids

Sequence
(BLAST)

001: MGKGRSCRYG SERLLYPVQV SGGGHLADMD EEDVWSVLAA PAPDSNRSTG MGRQPEQERR GRWTAGGLSL AFEATASAPA GRHHHHVASS APVKVPEWPA
101: GRFPAGAGGE QHGYGVSCRD EEGEWMAPHE YLQAQARSSG RGTAAPSVFE GVGRTLKGRD LSRVRDAVWS NTGFFG

Best Arabidopsis Sequence Match ( AT1G11700.1 )
(BLAST)

001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G

Arabidopsis Description

At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.