Factsheet for TraesCS2B01G286300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G266500.1	Wheat	mitochondrion, nucleus	95.56	96.63
TraesCS2A01G256200.1	Wheat	mitochondrion, nucleus	95.56	94.51
HORVU2Hr1G064730.1	Barley	cytosol	88.89	90.91
EER97815	Sorghum	mitochondrion	51.67	55.36
GSMUA_Achr7P00240_001	Banana	extracellular	21.67	45.35
KRH11426	Soybean	mitochondrion	43.33	40.41
KRH20860	Soybean	mitochondrion	43.33	40.0
VIT_10s0116g01810.t01	Wine grape	mitochondrion, nucleus	42.78	39.9
Bra013574.1-P	Field mustard	cytosol	37.78	39.31
CDX79110	Canola	nucleus	37.78	39.31
CDX82885	Canola	nucleus	37.22	38.73
AT4G21930.1	Thale cress	cytosol	38.33	37.7
GSMUA_Achr4P33500_001	Banana	nucleus	37.78	37.16
GSMUA_AchrUn_...	Banana	nucleus	37.22	36.81
VIT_10s0116g01820.t01	Wine grape	mitochondrion, nucleus	43.33	36.62
TraesCS2B01G247900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	33.33	35.5
AT1G11700.1	Thale cress	nucleus	39.44	35.32
CDY12918	Canola	cytosol	38.33	34.85
AT1G61930.1	Thale cress	cytosol	38.89	34.48
Solyc02g080510.1.1	Tomato	mitochondrion	38.89	33.98
CDY19509	Canola	cytosol	37.22	33.84
Bra027071.1-P	Field mustard	cytosol	37.22	33.84
CDX97979	Canola	mitochondrion	38.33	33.82
PGSC0003DMT400042431	Potato	mitochondrion, nucleus	38.89	33.82
KRH02073	Soybean	nucleus	40.0	33.8
PGSC0003DMT400032972	Potato	mitochondrion	37.22	33.67
CDY49797	Canola	mitochondrion	38.33	33.66
Bra019837.1-P	Field mustard	mitochondrion	38.33	33.66
CDY34631	Canola	nucleus	36.11	32.34
Solyc02g032800.1.1	Tomato	nucleus	38.33	32.09
TraesCS5B01G126400.1	Wheat	cytosol	27.22	31.21
KRH51082	Soybean	nucleus	40.0	31.17
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	27.22	28.66
TraesCS2B01G407800.1	Wheat	nucleus	31.11	27.86
TraesCS1B01G174100.1	Wheat	mitochondrion	25.0	24.86
TraesCS2B01G397000.1	Wheat	mitochondrion	24.44	24.72
TraesCS4B01G397900.1	Wheat	cytosol	28.33	24.06
TraesCS2B01G312200.1	Wheat	nucleus	30.0	22.88
TraesCS3B01G407500.1	Wheat	nucleus	26.67	22.33
TraesCS6B01G258900.1	Wheat	nucleus	20.56	21.39

Protein Annotations

EnsemblPlants:TraesCS2B01G286300.1	EnsemblPlantsGene:TraesCS2B01G286300	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF41	PFAM:PF04520
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:394317768..394318559

Molecular Weight (calculated)

19256.2 Da

IEP (calculated)

7.769

GRAVY (calculated)

-0.614

Length

180 amino acids

Sequence
(BLAST)

001: MGKGRSCRYG SERLLYPVQA SGHHVAGAAD HLADLDEEDV WSVLAAPAPD SNRSTSSGRQ PEQVRRGRWT AGGLSLAFEA TASAPAGRHH HHVASSAPVR
101: VPEWPAARFP PGSGEHGYGV SCREEDGEWM APHEYLQAQA RSSGRGTAAP SVFEGVGRTL KGRDLSRVRD AVWSNTGFFG

Best Arabidopsis Sequence Match ( AT1G11700.1 )
(BLAST)

001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G

Arabidopsis Description

At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.