Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 40.7 | 31.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.42 | 30.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.14 | 27.47 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 58.14 | 27.32 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 52.33 | 23.32 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 36.05 | 22.96 |
| EER97815 | Sorghum | mitochondrion | 44.19 | 22.62 |
| CDX82885 | Canola | nucleus | 45.35 | 22.54 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 45.35 | 22.16 |
| Bra013574.1-P | Field mustard | cytosol | 44.19 | 21.97 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 45.35 | 21.91 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 45.35 | 21.67 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 45.35 | 21.43 |
| CDX79110 | Canola | nucleus | 43.02 | 21.39 |
| AT4G21930.1 | Thale cress | cytosol | 45.35 | 21.31 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 41.86 | 21.3 |
| GSMUA_Achr6P06990_001 | Banana | mitochondrion, nucleus | 41.86 | 21.3 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 41.86 | 21.3 |
| KRH11426 | Soybean | mitochondrion | 47.67 | 21.24 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 52.33 | 21.13 |
| KRH20860 | Soybean | mitochondrion | 47.67 | 21.03 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 50.0 | 20.87 |
| Zm00001d006489_P001 | Maize | mitochondrion | 46.51 | 20.83 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 40.7 | 20.71 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 48.84 | 20.29 |
| EER99449 | Sorghum | mitochondrion | 45.35 | 20.1 |
| KRH02073 | Soybean | nucleus | 48.84 | 19.72 |
| Zm00001d021627_P001 | Maize | mitochondrion | 43.02 | 19.68 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.56 | 19.58 |
| Solyc02g032800.1.1 | Tomato | nucleus | 48.84 | 19.53 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 44.19 | 19.1 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 36.05 | 18.9 |
| Os07t0516300-01 | Rice | mitochondrion | 43.02 | 18.88 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 37.21 | 18.71 |
| GSMUA_Achr10P... | Banana | nucleus | 44.19 | 18.54 |
| KRH51082 | Soybean | nucleus | 48.84 | 18.18 |
| CDY34631 | Canola | nucleus | 41.86 | 17.91 |
| AT1G11700.1 | Thale cress | nucleus | 40.7 | 17.41 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 32.56 | 17.28 |
| CDY49797 | Canola | mitochondrion | 40.7 | 17.07 |
| Bra019837.1-P | Field mustard | mitochondrion | 40.7 | 17.07 |
| AT1G61930.1 | Thale cress | cytosol | 39.53 | 16.75 |
| CDY19509 | Canola | cytosol | 38.37 | 16.67 |
| CDY12918 | Canola | cytosol | 38.37 | 16.67 |
| CDX97979 | Canola | mitochondrion | 39.53 | 16.67 |
| Bra027071.1-P | Field mustard | cytosol | 38.37 | 16.67 |
| HORVU2Hr1G046550.2 | Barley | plastid | 37.21 | 15.46 |
| GSMUA_Achr1P04050_001 | Banana | mitochondrion | 33.72 | 14.57 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P00240_001 | EnsemblPlants:GSMUA_Achr7T00240_001 | EnsemblPlantsGene:GSMUA_Achr7G00240_001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 |
| PFAM:PF04520 | UniParc:UPI000296F27B | UniProt:M0TDG4 | MapMan:35.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G00240_001]
Coordinates
chr7:+:227140..231191
Molecular Weight (calculated)
9810.7 Da
IEP (calculated)
6.766
GRAVY (calculated)
-0.131
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MNIFFCYQRC VPFDQAGCFF GFMVVLVPDL KHDYDADEWL PPHEYVARAH GRSMATSVLE GAGRTLKGRD MSRVRDAVWS QTGFFG
001: MGKGRSLPIS RSERFLGSHQ QSDDHHVDGE TTFELELMEE DVWSVVEPDE PKELGAWNAR SLEASGSEWR RKGGRVSDLT VPSDGQRKRH VATSAPVKVP
101: DWSKILKVES VKSMHNNNND NDNADVADCD WESAMVPPHE YVAARSRNGD GGSSVFLGVG RTLKGRDMRR VRDAVWSQTG FYG
101: DWSKILKVES VKSMHNNNND NDNADVADCD WESAMVPPHE YVAARSRNGD GGSSVFLGVG RTLKGRDMRR VRDAVWSQTG FYG
Arabidopsis Description
Uncharacterized protein At4g21930 [Source:UniProtKB/TrEMBL;Acc:Q8L864]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.