Factsheet for GSMUA_Achr11P26220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	27.03	43.48
GSMUA_Achr10P...	Banana	nucleus	75.68	40.98
GSMUA_Achr7P00240_001	Banana	extracellular	31.53	40.7
GSMUA_Achr6P06990_001	Banana	mitochondrion, nucleus	56.76	37.28
TraesCS5B01G126400.1	Wheat	cytosol	45.95	32.48
HORVU0Hr1G038250.1	Barley	cytosol	45.95	32.48
TraesCS5D01G134900.1	Wheat	cytosol	45.05	31.85
TraesCS5A01G127300.1	Wheat	cytosol	45.05	31.85
Zm00001d025070_P001	Maize	cytosol, plastid	30.63	30.91
Zm00001d048508_P001	Maize	mitochondrion	45.95	29.82
Os11t0154300-01	Rice	cytosol, mitochondrion, plastid	45.05	29.24
Zm00001d051400_P001	Maize	mitochondrion	31.53	28.46
Zm00001d023440_P001	Maize	cytosol, peroxisome, plastid	43.24	28.4
EES15690	Sorghum	cytosol, mitochondrion, plastid	44.14	28.32
HORVU4Hr1G089030.1	Barley	cytosol	49.55	28.21
GSMUA_Achr11P...	Banana	mitochondrion	36.04	27.97
Os03t0113900-02	Rice	cytosol, mitochondrion, plastid	48.65	27.41
GSMUA_Achr2P13950_001	Banana	nucleus	32.43	26.67
GSMUA_Achr1P04050_001	Banana	mitochondrion	46.85	26.13
TraesCS5A01G539400.1	Wheat	cytosol	47.75	25.73
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	36.94	25.0
TraesCS4B01G397900.1	Wheat	cytosol	47.75	25.0
TraesCSU01G115900.1	Wheat	cytosol	45.95	24.52
GSMUA_Achr8P18920_001	Banana	cytosol, mitochondrion	35.14	24.07
TraesCS2B01G407800.1	Wheat	nucleus	43.24	23.88
Os04t0542000-01	Rice	cytosol, nucleus, plastid	44.14	23.45
HORVU2Hr1G092750.1	Barley	cytosol, mitochondrion, nucleus, plastid	42.34	23.38
TraesCS2A01G391200.1	Wheat	nucleus	42.34	23.38
GSMUA_AchrUn_...	Banana	nucleus	37.84	23.08
Zm00001d002798_P001	Maize	mitochondrion	43.24	22.97
GSMUA_Achr4P33500_001	Banana	nucleus	37.84	22.95
EES11200	Sorghum	mitochondrion	44.14	22.69
TraesCS2D01G387500.1	Wheat	cytosol, nucleus, plastid	40.54	22.28
Zm00001d025967_P001	Maize	nucleus	41.44	21.8
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	32.43	21.05
Os12t0156000-00	Rice	nucleus	39.64	15.6

Protein Annotations

EnsemblPlants:GSMUA_Achr11P26220_001	EnsemblPlants:GSMUA_Achr11T26220_001	EnsemblPlantsGene:GSMUA_Achr11G26220_001	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF42
PFAM:PF04520	SEG:seg	UniParc:UPI000295D1F4	UniProt:M0RVK2	MapMan:35.2	:

Description

DUF584 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G26220_001]

Coordinates

chr11:+:25073229..25073921

Molecular Weight (calculated)

11961.1 Da

IEP (calculated)

5.549

GRAVY (calculated)

-0.623

Length

111 amino acids

Sequence
(BLAST)

001: MEGLRHQRSP GSDRFLGLFS PPPPDQPAGV ELHESDVLTT GLGVEGADGA DDGGGDEHEM MMPPHEIVAR THGRGSRMTT FSVLEGAGRT LKGRDLRRVR
101: DAVLRQTGFV D

Best Arabidopsis Sequence Match ( AT3G15040.1 )
(BLAST)

001: MNKNPRLDFS SPSSLATISD SADGELNEDD IFAIDISHAP PQARHSPVSS PAKQQTPARQ LQRSKSGLKN VEASGILAAL PESSGSSSYL SHVFHHKPAA
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID

Arabidopsis Description

At3g15040 [Source:UniProtKB/TrEMBL;Acc:Q9LKA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.