Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025070_P001 | Maize | cytosol, plastid | 86.18 | 96.36 |
| Zm00001d048508_P001 | Maize | mitochondrion | 82.93 | 59.65 |
| HORVU4Hr1G089030.1 | Barley | cytosol | 69.11 | 43.59 |
| Os03t0113900-02 | Rice | cytosol, mitochondrion, plastid | 68.29 | 42.64 |
| TraesCS5A01G539400.1 | Wheat | cytosol | 70.73 | 42.23 |
| TraesCS4B01G397900.1 | Wheat | cytosol | 71.54 | 41.51 |
| TraesCSU01G115900.1 | Wheat | cytosol | 69.92 | 41.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.14 | 37.68 |
| GSMUA_Achr11P... | Banana | cytosol | 28.46 | 31.53 |
| Zm00001d023440_P001 | Maize | cytosol, peroxisome, plastid | 41.46 | 30.18 |
| Zm00001d002798_P001 | Maize | mitochondrion | 51.22 | 30.14 |
| Zm00001d025967_P001 | Maize | nucleus | 49.59 | 28.91 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 36.59 | 25.14 |
| Zm00001d042760_P001 | Maize | nucleus | 41.46 | 24.17 |
| GSMUA_Achr10P... | Banana | nucleus | 37.4 | 22.44 |
| Zm00001d003775_P001 | Maize | cytosol, mitochondrion, nucleus | 42.28 | 20.97 |
| Zm00001d032976_P001 | Maize | mitochondrion, nucleus | 43.09 | 20.95 |
| Zm00001d006489_P001 | Maize | mitochondrion | 31.71 | 20.31 |
| Zm00001d021627_P001 | Maize | mitochondrion | 30.89 | 20.21 |
| Zm00001d017287_P001 | Maize | cytosol | 27.64 | 20.0 |
| Zm00001d025872_P001 | Maize | mitochondrion | 28.46 | 19.44 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 28.46 | 19.02 |
Protein Annotations
| EnsemblPlants:Zm00001d051400_P001 | EnsemblPlants:Zm00001d051400_T001 | EnsemblPlantsGene:Zm00001d051400 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF6 |
| PFAM:PF04520 | ProteinID:AQK54157.1 | SEG:seg | UniParc:UPI000221D1EF | UniProt:A0A1D6Q6M4 | MapMan:35.2 |
Description
OJ000126_13.10 protein; protein
Coordinates
chr4:+:157135550..157135921
Molecular Weight (calculated)
13014.5 Da
IEP (calculated)
11.126
GRAVY (calculated)
-0.408
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGQPRRRAC AHAVPHSFGL PSLLAEGCGG GVPVPVPGRA MAPRQSAPVR VPAAWPAGGW RAGGRKADED EEDDEEVVPP HVVAARRHAR SSSVLEGTGR
101: TVKGRDLRSV RNAVLRQTGF LDL
101: TVKGRDLRSV RNAVLRQTGF LDL
001: MEKSYMKHEL WGDGDFQEDD VWDVLDGYQS PFMISSNHTT KPSFSTQTLL PSEPRMIPER QRTEGMAPMR QQSVPVNVPD WSMVQRKKTK KVVDDENVSP
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
Arabidopsis Description
At4g26950 [Source:UniProtKB/TrEMBL;Acc:Q9SZ34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.