Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002798_P001 | Maize | mitochondrion | 79.15 | 79.9 |
| EES11200 | Sorghum | mitochondrion | 81.52 | 79.63 |
| Os04t0542000-01 | Rice | cytosol, nucleus, plastid | 67.77 | 68.42 |
| HORVU2Hr1G092750.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 62.09 | 65.17 |
| TraesCS2A01G391200.1 | Wheat | nucleus | 62.09 | 65.17 |
| TraesCS2B01G407800.1 | Wheat | nucleus | 62.09 | 65.17 |
| TraesCS2D01G387500.1 | Wheat | cytosol, nucleus, plastid | 61.14 | 63.86 |
| Zm00001d025070_P001 | Maize | cytosol, plastid | 28.44 | 54.55 |
| Zm00001d048508_P001 | Maize | mitochondrion | 40.28 | 49.71 |
| Zm00001d051400_P001 | Maize | mitochondrion | 28.91 | 49.59 |
| GSMUA_Achr11P... | Banana | cytosol | 21.8 | 41.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.8 | 39.13 |
| Zm00001d023440_P001 | Maize | cytosol, peroxisome, plastid | 31.28 | 39.05 |
| Zm00001d021627_P001 | Maize | mitochondrion | 29.38 | 32.98 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 27.96 | 32.96 |
| Zm00001d042760_P001 | Maize | nucleus | 32.7 | 32.7 |
| Zm00001d025872_P001 | Maize | mitochondrion | 27.49 | 32.22 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 27.49 | 31.52 |
| GSMUA_Achr10P... | Banana | nucleus | 29.86 | 30.73 |
| Zm00001d006489_P001 | Maize | mitochondrion | 27.49 | 30.21 |
| Zm00001d032976_P001 | Maize | mitochondrion, nucleus | 35.07 | 29.25 |
| Zm00001d003775_P001 | Maize | cytosol, mitochondrion, nucleus | 34.12 | 29.03 |
| Zm00001d017287_P001 | Maize | cytosol | 22.75 | 28.24 |
Protein Annotations
| EnsemblPlants:Zm00001d025967_P001 | EnsemblPlants:Zm00001d025967_T001 | EnsemblPlantsGene:Zm00001d025967 | EntrezGene:103641894 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF8 | PFAM:PF04520 | ProteinID:AQK45173.1 | SEG:seg | UniParc:UPI000221F0AA | UniProt:K7TMH1 |
| MapMan:35.2 | : | : | : | : | : |
Description
OJ000126_13.10 protein; protein
Coordinates
chr10:+:134992932..134993567
Molecular Weight (calculated)
22778.7 Da
IEP (calculated)
11.166
GRAVY (calculated)
-0.604
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTPRHRLVT ASPSLRFLGL LKQPDHASAQ DLELDERDVV WSSSSSSSSS AASSPSPSSS PSPAASLRRP VSASSSRHFP AGSMGLSALL ADDHHHQRAP
101: TAPVPVVARP ERQQQQRAPQ PYHRSAPVAV PAWPKAMQPV TDRRRREAEL LQAAPDDGYD DGEPVVPPHE MAARRAAAAA SVMEGVGRTL KGRDLRRVRN
201: AVWRTTGFLD L
101: TAPVPVVARP ERQQQQRAPQ PYHRSAPVAV PAWPKAMQPV TDRRRREAEL LQAAPDDGYD DGEPVVPPHE MAARRAAAAA SVMEGVGRTL KGRDLRRVRN
201: AVWRTTGFLD L
001: MNKNPRLDFS SPSSLATISD SADGELNEDD IFAIDISHAP PQARHSPVSS PAKQQTPARQ LQRSKSGLKN VEASGILAAL PESSGSSSYL SHVFHHKPAA
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID
Arabidopsis Description
At3g15040 [Source:UniProtKB/TrEMBL;Acc:Q9LKA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.