Factsheet for GSMUA_AchrUn_randomP23690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	43.48	27.03
GSMUA_Achr6P06990_001	Banana	mitochondrion, nucleus	62.32	25.44
GSMUA_Achr7P00240_001	Banana	extracellular	30.43	24.42
Zm00001d025070_P001	Maize	cytosol, plastid	37.68	23.64
Zm00001d051400_P001	Maize	mitochondrion	37.68	21.14
GSMUA_Achr2P13950_001	Banana	nucleus	37.68	19.26
TraesCS5D01G134900.1	Wheat	cytosol	42.03	18.47
TraesCS5B01G126400.1	Wheat	cytosol	42.03	18.47
TraesCS5A01G127300.1	Wheat	cytosol	42.03	18.47
HORVU0Hr1G038250.1	Barley	cytosol	42.03	18.47
Zm00001d023440_P001	Maize	cytosol, peroxisome, plastid	42.03	17.16
Zm00001d048508_P001	Maize	mitochondrion	42.03	16.96
GSMUA_Achr11P...	Banana	mitochondrion	34.78	16.78
EES15690	Sorghum	cytosol, mitochondrion, plastid	42.03	16.76
Os11t0154300-01	Rice	cytosol, mitochondrion, plastid	40.58	16.37
Os03t0113900-02	Rice	cytosol, mitochondrion, plastid	46.38	16.24
GSMUA_Achr1P04050_001	Banana	mitochondrion	46.38	16.08
HORVU4Hr1G089030.1	Barley	cytosol	43.48	15.38
GSMUA_Achr8P18920_001	Banana	cytosol, mitochondrion	34.78	14.81
GSMUA_Achr10P...	Banana	nucleus	43.48	14.63
TraesCS5A01G539400.1	Wheat	cytosol	42.03	14.08
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	33.33	14.02
TraesCSU01G115900.1	Wheat	cytosol	42.03	13.94
TraesCS4B01G397900.1	Wheat	cytosol	42.03	13.68
Os04t0542000-01	Rice	cytosol, nucleus, plastid	40.58	13.4
Zm00001d002798_P001	Maize	mitochondrion	40.58	13.4
EES11200	Sorghum	mitochondrion	40.58	12.96
HORVU2Hr1G092750.1	Barley	cytosol, mitochondrion, nucleus, plastid	37.68	12.94
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	31.88	12.87
Zm00001d025967_P001	Maize	nucleus	39.13	12.8
TraesCS2B01G407800.1	Wheat	nucleus	36.23	12.44
TraesCS2A01G391200.1	Wheat	nucleus	36.23	12.44
TraesCS2D01G387500.1	Wheat	cytosol, nucleus, plastid	36.23	12.38
GSMUA_AchrUn_...	Banana	nucleus	28.99	10.99
GSMUA_Achr4P33500_001	Banana	nucleus	28.99	10.93
Os12t0156000-00	Rice	nucleus	42.03	10.28

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP23690_001	EnsemblPlants:GSMUA_AchrUn_randomT23690_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG23690_001	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF42
PFAM:PF04520	UniParc:UPI000294F7A9	UniProt:M0UBS7	MapMan:35.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23690_001]

Coordinates

chrchrUn_random:-:116536579..116536788

Molecular Weight (calculated)

7640.6 Da

IEP (calculated)

11.505

GRAVY (calculated)

-0.223

Length

69 amino acids

Sequence
(BLAST)

1: MLVISGSIQL GSKPRAQEDR CGRREDLMLG VDVGKMIPFS VLKGAGRTLK GRDLRRVRNV VLQKTGFLD

Best Arabidopsis Sequence Match ( AT3G45210.1 )
(BLAST)

001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD

Arabidopsis Description

AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.