Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G127300.1 | Wheat | cytosol | 98.09 | 98.09 |
| TraesCS5B01G126400.1 | Wheat | cytosol | 96.82 | 96.82 |
| HORVU0Hr1G038250.1 | Barley | cytosol | 92.99 | 92.99 |
| EES15690 | Sorghum | cytosol, mitochondrion, plastid | 75.8 | 68.79 |
| Zm00001d023440_P001 | Maize | cytosol, peroxisome, plastid | 72.61 | 67.46 |
| Os11t0154300-01 | Rice | cytosol, mitochondrion, plastid | 71.97 | 66.08 |
| GSMUA_Achr11P... | Banana | cytosol | 31.85 | 45.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.47 | 42.03 |
| GSMUA_Achr10P... | Banana | nucleus | 42.04 | 32.2 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 36.94 | 32.04 |
| TraesCS2D01G387500.1 | Wheat | cytosol, nucleus, plastid | 38.85 | 30.2 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.85 | 29.59 |
| TraesCS3D01G367800.1 | Wheat | nucleus | 39.49 | 29.25 |
| TraesCS2D01G293600.1 | Wheat | nucleus | 42.68 | 27.92 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 29.94 | 26.4 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 28.03 | 25.43 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 28.03 | 24.86 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G134900.1 | EnsemblPlantsGene:TraesCS5D01G134900 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF20 | PFAM:PF04520 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:215256058..215256531
Molecular Weight (calculated)
16463.8 Da
IEP (calculated)
11.548
GRAVY (calculated)
-0.320
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRLLLSRPP MPTPVHGAAT AADGDLLELD VLWPASSAPG LLAALPDDEA KKKQKRAGGP AVRSAARAVP EKAALTPSSV ARSAPVRIPS DAAARRGRWP
101: HVVGGGDDGD AMVPPHEIVA RRAAAHSSVL EGAGRTLKGR DLRRVRNTVL RRTGFLD
101: HVVGGGDDGD AMVPPHEIVA RRAAAHSSVL EGAGRTLKGR DLRRVRNTVL RRTGFLD
001: MSEEFDESEI IFSDNYFPIR RREDGNEKEN NRPVDFRENS ERVWNKSSRR SKTTPLPSAV TAFSSSLPVN IPMRRYSTEE EYSDDDGGRK MIPPHLIVGR
101: RMEGGQMAFS VCTGNGRTLK GRDLSRVRNS VLKLTGFLEA
101: RMEGGQMAFS VCTGNGRTLK GRDLSRVRNS VLKLTGFLEA
Arabidopsis Description
At1g29640 [Source:UniProtKB/TrEMBL;Acc:Q9C7N7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.