Factsheet for TraesCS2D01G228500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G222500.1	Wheat	cytosol	96.45	96.45
TraesCS2B01G247900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	95.86	95.86
Zm00001d021627_P001	Maize	mitochondrion	65.09	58.51
Zm00001d006489_P001	Maize	mitochondrion	65.09	57.29
EER99449	Sorghum	mitochondrion	64.5	56.19
Os07t0516300-01	Rice	mitochondrion	63.91	55.1
HORVU2Hr1G046550.2	Barley	plastid	59.17	48.31
GSMUA_Achr7P00240_001	Banana	extracellular	20.71	40.7
KRH20860	Soybean	mitochondrion	38.46	33.33
KRH11426	Soybean	mitochondrion	37.87	33.16
GSMUA_AchrUn_...	Banana	nucleus	35.5	32.97
GSMUA_Achr4P33500_001	Banana	nucleus	35.5	32.79
VIT_10s0116g01810.t01	Wine grape	mitochondrion, nucleus	37.28	32.64
TraesCS2D01G266500.1	Wheat	mitochondrion, nucleus	34.32	32.58
TraesCS5D01G134900.1	Wheat	cytosol	29.59	31.85
Bra013574.1-P	Field mustard	cytosol	32.54	31.79
CDX79110	Canola	nucleus	32.54	31.79
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	31.95	31.58
CDX82885	Canola	nucleus	31.95	31.21
TraesCS2D01G387500.1	Wheat	cytosol, nucleus, plastid	36.69	30.69
AT4G21930.1	Thale cress	cytosol	33.14	30.6
PGSC0003DMT400032972	Potato	mitochondrion	35.5	30.15
VIT_10s0116g01820.t01	Wine grape	mitochondrion, nucleus	37.87	30.05
Solyc02g080510.1.1	Tomato	mitochondrion	36.09	29.61
PGSC0003DMT400042431	Potato	mitochondrion, nucleus	36.09	29.47
AT1G11700.1	Thale cress	nucleus	34.91	29.35
CDY34631	Canola	nucleus	34.91	29.35
TraesCS1D01G155400.1	Wheat	mitochondrion	31.36	29.28
Bra019837.1-P	Field mustard	mitochondrion	35.5	29.27
CDY49797	Canola	mitochondrion	35.5	29.27
KRH02073	Soybean	nucleus	36.69	29.11
CDX97979	Canola	mitochondrion	34.91	28.92
Solyc02g032800.1.1	Tomato	nucleus	36.09	28.37
TraesCS2D01G376300.1	Wheat	mitochondrion	29.59	28.25
AT1G61930.1	Thale cress	cytosol	33.73	28.08
Bra027071.1-P	Field mustard	cytosol	32.54	27.78
CDY19509	Canola	cytosol	32.54	27.78
CDY12918	Canola	cytosol	31.95	27.27
KRH51082	Soybean	nucleus	36.69	26.84
TraesCS6D01G212800.1	Wheat	cytosol	25.44	24.86
TraesCS3D01G367800.1	Wheat	nucleus	28.4	22.64
TraesCS2D01G293600.1	Wheat	nucleus	28.4	20.0

Protein Annotations

EnsemblPlants:TraesCS2D01G228500.1	EnsemblPlantsGene:TraesCS2D01G228500	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF11	PFAM:PF04520
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:197836937..197838122

Molecular Weight (calculated)

18408.2 Da

IEP (calculated)

6.278

GRAVY (calculated)

-0.790

Length

169 amino acids

Sequence
(BLAST)

001: MAKARKPTAF SAAERFLGFH HRPGSATVAP SPYDDLPDLA ESDVWYSPSS DAPTTTADQD GIQRTDRASR GEPPRRVGGL SRAFADGRQV ASSAPVEMPA
101: WPSRFADLEP EPEPDERPQE DADGWVPPHV YLARRQARAS VVEGVGRTLK GRDASRVRDA VWSRTGFPG

Best Arabidopsis Sequence Match ( AT1G61930.1 )
(BLAST)

001: MAKGRKPTTM NRSDRYLGSY TYGDSHGNSV TDELELGEED IWSPAVIHDD TTENEESYGT WNLRATLGKN GRVGGLSLAF EGSLVAPPSS SPMIVQKIHG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG

Arabidopsis Description

At1g61930 [Source:UniProtKB/TrEMBL;Acc:O80698]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.