Factsheet for Bra019837.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97979	Canola	mitochondrion	99.02	99.51
CDY49797	Canola	mitochondrion	98.05	98.05
AT1G11700.1	Thale cress	nucleus	85.85	87.56
Bra027071.1-P	Field mustard	cytosol	65.37	67.68
Solyc02g080510.1.1	Tomato	mitochondrion	49.76	49.51
PGSC0003DMT400032972	Potato	mitochondrion	47.8	49.25
PGSC0003DMT400042431	Potato	mitochondrion, nucleus	49.27	48.79
Solyc02g032800.1.1	Tomato	nucleus	49.76	47.44
Bra013574.1-P	Field mustard	cytosol	37.56	44.51
GSMUA_AchrUn_...	Banana	nucleus	36.59	41.21
GSMUA_Achr7P00240_001	Banana	extracellular	17.07	40.7
GSMUA_Achr4P33500_001	Banana	nucleus	35.61	39.89
TraesCS2D01G266500.1	Wheat	mitochondrion, nucleus	34.15	39.33
HORVU2Hr1G064730.1	Barley	cytosol	33.17	38.64
TraesCS2A01G256200.1	Wheat	mitochondrion, nucleus	34.15	38.46
TraesCS2B01G286300.1	Wheat	mitochondrion, nucleus	33.66	38.33
EER97815	Sorghum	mitochondrion	29.76	36.31
TraesCS2A01G222500.1	Wheat	cytosol	29.76	36.09
TraesCS2D01G228500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	29.27	35.5
TraesCS2B01G247900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	29.27	35.5
Bra002459.1-P	Field mustard	nucleus	24.39	31.25
Bra020237.1-P	Field mustard	nucleus	24.88	30.72
Bra013577.1-P	Field mustard	nucleus	22.44	30.07
Bra019408.1-P	Field mustard	nucleus	22.93	29.94
Zm00001d006489_P001	Maize	mitochondrion	27.8	29.69
Os07t0516300-01	Rice	mitochondrion	28.29	29.59
EER99449	Sorghum	mitochondrion	27.32	28.87
Bra029510.1-P	Field mustard	nucleus	20.98	28.86
Zm00001d021627_P001	Maize	mitochondrion	26.34	28.72
Bra019080.1-P	Field mustard	nucleus	20.98	28.48
Bra009543.1-P	Field mustard	nucleus	23.41	27.27
Bra005738.1-P	Field mustard	cytosol	22.93	26.4
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	20.98	25.15
Bra027283.1-P	Field mustard	nucleus	25.37	24.19
HORVU2Hr1G046550.2	Barley	plastid	22.93	22.71
Bra001580.1-P	Field mustard	nucleus	24.88	22.67
Bra021587.1-P	Field mustard	nucleus	23.41	21.82
Bra035703.1-P	Field mustard	cytosol	20.98	17.48

Protein Annotations

EnsemblPlants:Bra019837.1	EnsemblPlants:Bra019837.1-P	EnsemblPlantsGene:Bra019837	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF11
PFAM:PF04520	SEG:seg	UniParc:UPI000253EB8C	UniProt:M4DTJ4	MapMan:35.2	:

Description

AT1G11700 (E=1e-077) | unknown protein

Coordinates

chrA06:+:4074183..4074800

Molecular Weight (calculated)

22119.3 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.744

Length

205 amino acids

Sequence
(BLAST)

001: MARVRKLTIS QSERYLGSSY SFGDSNGNSV TDESELTEED VWSHAVDHSP EDTPESFGAW SSRDAVMRNG RVCGGLSLAF EDMSSSPTIV HQIRGGGEVG
101: GGEVGGGGGG GQAQRQLASS APVNVPDWSK IYRVNSVESI HESEEEEDEE SGMMPPHEYL AKSQKRRSRK SGGGASVFEG VGKTLKGREL RRVRDAIWSQ
201: TGFYG

Best Arabidopsis Sequence Match ( AT1G11700.1 )
(BLAST)

001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G

Arabidopsis Description

At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.