Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G222500.1 | Wheat | cytosol | 55.1 | 63.91 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 55.1 | 63.91 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 55.1 | 63.91 |
| EER99449 | Sorghum | mitochondrion | 55.61 | 56.19 |
| Zm00001d021627_P001 | Maize | mitochondrion | 53.57 | 55.85 |
| Zm00001d006489_P001 | Maize | mitochondrion | 54.08 | 55.21 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 18.88 | 43.02 |
| HORVU2Hr1G046550.2 | Barley | plastid | 38.78 | 36.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.16 | 35.71 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 33.16 | 35.52 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 29.59 | 33.92 |
| CDX79110 | Canola | nucleus | 29.59 | 33.53 |
| Bra013574.1-P | Field mustard | cytosol | 29.59 | 33.53 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 32.65 | 33.16 |
| KRH11426 | Soybean | mitochondrion | 32.14 | 32.64 |
| CDX82885 | Canola | nucleus | 28.57 | 32.37 |
| KRH20860 | Soybean | mitochondrion | 32.14 | 32.31 |
| AT4G21930.1 | Thale cress | cytosol | 30.1 | 32.24 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 32.14 | 30.58 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 30.61 | 30.15 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 32.65 | 30.05 |
| Os11t0154300-01 | Rice | cytosol, mitochondrion, plastid | 26.02 | 29.82 |
| KRH02073 | Soybean | nucleus | 32.14 | 29.58 |
| CDY34631 | Canola | nucleus | 30.1 | 29.35 |
| AT1G11700.1 | Thale cress | nucleus | 30.1 | 29.35 |
| Os04t0542000-01 | Rice | cytosol, nucleus, plastid | 31.12 | 29.19 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 30.61 | 28.99 |
| Os03t0113900-02 | Rice | cytosol, mitochondrion, plastid | 29.08 | 28.93 |
| Solyc02g032800.1.1 | Tomato | nucleus | 31.12 | 28.37 |
| Bra019837.1-P | Field mustard | mitochondrion | 29.59 | 28.29 |
| CDY49797 | Canola | mitochondrion | 29.59 | 28.29 |
| AT1G61930.1 | Thale cress | cytosol | 29.08 | 28.08 |
| CDX97979 | Canola | mitochondrion | 29.08 | 27.94 |
| KRH51082 | Soybean | nucleus | 32.14 | 27.27 |
| Bra027071.1-P | Field mustard | cytosol | 27.55 | 27.27 |
| CDY19509 | Canola | cytosol | 27.55 | 27.27 |
| Os04t0520700-01 | Rice | mitochondrion | 23.98 | 27.01 |
| CDY12918 | Canola | cytosol | 27.04 | 26.77 |
| Os02t0629000-01 | Rice | mitochondrion | 20.41 | 23.53 |
| Os04t0413900-01 | Rice | nucleus | 27.55 | 22.04 |
| Os01t0862600-01 | Rice | nucleus | 23.98 | 21.46 |
| Os12t0156000-00 | Rice | nucleus | 21.43 | 14.89 |
| Os10t0481000-00 | Rice | mitochondrion | 20.92 | 13.71 |
Protein Annotations
| EMBL:AK069570 | EMBL:AK102726 | EnsemblPlants:Os07t0516300-01 | EnsemblPlantsGene:Os07g0516300 | EntrezGene:4343380 | InterPro:Senescence_reg_S40 |
| PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 | ProteinID:BAC84252.1 | ProteinID:BAF21696.1 | ProteinID:BAT01760.1 |
| RefSeq:XP_015645400.1 | SEG:seg | UniParc:UPI00001BF610 | UniProt:Q6Z2H5 | MapMan:35.2 | : |
Description
Protein of unknown function DUF584 family protein. (Os07t0516300-01)
Coordinates
chr7:-:19887349..19888283
Molecular Weight (calculated)
20275.0 Da
IEP (calculated)
5.884
GRAVY (calculated)
-0.782
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKARKQQPQ GPFAGGAAAG ERSFLGFQYH HHHRGGSVAP AYGDDDDLPD LAEADVWYAP SSEGGADHRG GGGGGGGGGG LEIGGGGWGG GKHKVGGLSR
101: AFADGRQVAA SAPVQVPAWP GRYADPDQAA FAEEEKRREE EDDAGDGDGD GWVPPHVYLA RRQARSSVVE GVGRTLKGRD ASRVRDAVWS RTGFDG
101: AFADGRQVAA SAPVQVPAWP GRYADPDQAA FAEEEKRREE EDDAGDGDGD GWVPPHVYLA RRQARSSVVE GVGRTLKGRD ASRVRDAVWS RTGFDG
001: MAKGRKPTTM NRSDRYLGSY TYGDSHGNSV TDELELGEED IWSPAVIHDD TTENEESYGT WNLRATLGKN GRVGGLSLAF EGSLVAPPSS SPMIVQKIHG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
Arabidopsis Description
At1g61930 [Source:UniProtKB/TrEMBL;Acc:O80698]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.