Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 89.67 | 98.96 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 63.38 | 65.53 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 63.38 | 65.22 |
| KRH20860 | Soybean | mitochondrion | 58.69 | 64.1 |
| KRH11426 | Soybean | mitochondrion | 57.75 | 63.73 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 58.69 | 62.81 |
| VIT_06s0080g00750.t01 | Wine grape | cytosol | 14.08 | 60.0 |
| Solyc02g032800.1.1 | Tomato | nucleus | 58.69 | 58.14 |
| KRH02073 | Soybean | nucleus | 56.34 | 56.34 |
| KRH51082 | Soybean | nucleus | 57.28 | 52.81 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 21.13 | 52.33 |
| CDX79110 | Canola | nucleus | 40.38 | 49.71 |
| AT4G21930.1 | Thale cress | cytosol | 42.25 | 49.18 |
| Bra013574.1-P | Field mustard | cytosol | 39.91 | 49.13 |
| CDX82885 | Canola | nucleus | 39.91 | 49.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.5 | 45.05 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 38.03 | 44.26 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 36.62 | 43.82 |
| EER97815 | Sorghum | mitochondrion | 34.27 | 43.45 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 37.09 | 43.41 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 36.62 | 43.33 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 35.68 | 43.18 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 30.99 | 39.05 |
| VIT_00s1488g00010.t01 | Wine grape | cytosol | 17.84 | 38.38 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 30.05 | 37.87 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 30.05 | 37.87 |
| Zm00001d006489_P001 | Maize | mitochondrion | 33.8 | 37.5 |
| VIT_06s0004g02830.t01 | Wine grape | cytosol | 28.64 | 36.53 |
| Zm00001d021627_P001 | Maize | mitochondrion | 30.99 | 35.11 |
| EER99449 | Sorghum | mitochondrion | 31.92 | 35.05 |
| VIT_08s0040g01860.t01 | Wine grape | cytosol | 26.29 | 34.15 |
| Os07t0516300-01 | Rice | mitochondrion | 30.05 | 32.65 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 25.35 | 31.58 |
| VIT_10s0116g01720.t01 | Wine grape | cytosol, mitochondrion, nucleus | 27.23 | 30.53 |
| VIT_16s0098g01240.t01 | Wine grape | nucleus | 29.11 | 30.1 |
| VIT_08s0007g02950.t01 | Wine grape | nucleus | 27.23 | 26.61 |
| HORVU2Hr1G046550.2 | Barley | plastid | 25.35 | 26.09 |
| VIT_19s0090g00510.t01 | Wine grape | plastid | 24.88 | 22.84 |
Protein Annotations
| EntrezGene:100246942 | wikigene:100246942 | EntrezGene:100855186 | wikigene:100855186 | MapMan:35.2 | ProteinID:CCB48221 |
| ProteinID:CCB48221.1 | UniProt:F6H7M9 | EMBL:FN595248 | EntrezGene:LOC100246942 | wikigene:LOC100246942 | EntrezGene:LOC100855186 |
| wikigene:LOC100855186 | PFAM:PF04520 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | InterPro:Senescence_reg_S40 | TIGR:TC68183 |
| UniParc:UPI0002109015 | ArrayExpress:VIT_10s0116g01820 | EnsemblPlantsGene:VIT_10s0116g01820 | EnsemblPlants:VIT_10s0116g01820.t01 | RefSeq:XP_002274403 | RefSeq:XP_002274403.1 |
| RefSeq:XP_003632945 | RefSeq:XP_003632945.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr10:-:1089124..1090233
Molecular Weight (calculated)
23330.9 Da
IEP (calculated)
6.655
GRAVY (calculated)
-0.864
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKGRKLTTS RSERLLGSFA YGHGQGAGAD SSELGEEDVW SMVDDMVERD DHVNGGGGGG GQSDWSPRAG GEPAIRNHHH RRRIPRDDRH QVGGLSLAFD
101: DSGKTASSRI VHQYRPQDGV TPSPRGHHMA TSAPVNVPDW HKILRVDSVE SLHDSDDDRE LEMVPPHEYL AREYAASRKM AATSVLEGVG RTLKGRDMSR
201: VRDAVWSQTG FDG
101: DSGKTASSRI VHQYRPQDGV TPSPRGHHMA TSAPVNVPDW HKILRVDSVE SLHDSDDDRE LEMVPPHEYL AREYAASRKM AATSVLEGVG RTLKGRDMSR
201: VRDAVWSQTG FDG
001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G
Arabidopsis Description
At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.