Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0080g00750.t01 | Wine grape | cytosol | 31.31 | 62.0 |
| VIT_10s0116g01720.t01 | Wine grape | cytosol, mitochondrion, nucleus | 100.0 | 52.11 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 57.58 | 42.22 |
| KRH20851 | Soybean | nucleus | 65.66 | 39.88 |
| Bra029510.1-P | Field mustard | nucleus | 58.59 | 38.93 |
| CDX94568 | Canola | nucleus | 56.57 | 37.33 |
| CDY29096 | Canola | nucleus | 56.57 | 37.33 |
| CDX82889 | Canola | nucleus | 54.55 | 35.53 |
| CDY16655 | Canola | nucleus | 58.59 | 34.73 |
| Bra013577.1-P | Field mustard | nucleus | 53.54 | 34.64 |
| CDX79115 | Canola | nucleus | 53.54 | 34.64 |
| AT4G04630.1 | Thale cress | cytosol, mitochondrion, nucleus | 58.59 | 34.52 |
| CDX98721 | Canola | nucleus | 54.55 | 34.39 |
| CDX94069 | Canola | nucleus | 54.55 | 34.39 |
| Bra019408.1-P | Field mustard | nucleus | 54.55 | 34.39 |
| KRH51093 | Soybean | nucleus | 64.65 | 33.86 |
| PGSC0003DMT400042495 | Potato | nucleus | 51.52 | 33.33 |
| AT4G21970.1 | Thale cress | nucleus | 52.53 | 33.12 |
| KRH02067 | Soybean | nucleus | 60.61 | 32.43 |
| Solyc02g080580.1.1 | Tomato | nucleus | 50.51 | 32.26 |
| VIT_06s0004g02830.t01 | Wine grape | cytosol | 46.46 | 27.54 |
| VIT_19s0090g00510.t01 | Wine grape | plastid | 61.62 | 26.29 |
| VIT_08s0040g01860.t01 | Wine grape | cytosol | 41.41 | 25.0 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 38.38 | 19.69 |
| VIT_08s0007g02950.t01 | Wine grape | nucleus | 40.4 | 18.35 |
| VIT_16s0098g01240.t01 | Wine grape | nucleus | 37.37 | 17.96 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 38.38 | 17.84 |
Protein Annotations
| ArrayExpress:VIT_00s1488g00010 | EMBL:FN595325 | EnsemblPlants:VIT_00s1488g00010.t01 | EnsemblPlantsGene:VIT_00s1488g00010 | EntrezGene:100853717 | InterPro:Senescence_reg_S40 |
| PANTHER:PTHR33083 | PANTHER:PTHR33083:SF4 | PFAM:PF04520 | ProteinID:CBI23543 | ProteinID:CBI23543.3 | RefSeq:XP_010647511.1 |
| SEG:seg | UniParc:UPI0001BE25AF | UniProt:D7SZ59 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrUn:-:39284177..39284476
Molecular Weight (calculated)
11033.8 Da
IEP (calculated)
4.407
GRAVY (calculated)
-0.594
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MNIPDWSKIY RKNSRAMPWV DGVEDVNDAG NTHQICVVDD DDDDDGDDDI VPPHEWIARK LASSQISSFS VCEGVGRTLK GRDLSKVRNA VLTKTGFLE
001: MDSLGSRRRT HNSRRVPSMG IEGDEEFQEE DVWSVLREGE TSSPEMKIPK SHFSSSSSSS SSPWNIRRSK EVSGVKQSSA PMNVPDWSKV YGDSKSNRRS
101: SHLHSHAADD DDEDDDGCMV PPHEWVARKL ARTQISSFSM CEGVGRTLKG RDLSKVRNAV LSKTGFLE
101: SHLHSHAADD DDEDDDGCMV PPHEWVARKL ARTQISSFSM CEGVGRTLKG RDLSKVRNAV LSKTGFLE
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q8LFI5]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.