Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79115 | Canola | nucleus | 100.0 | 100.0 |
| Bra019408.1-P | Field mustard | nucleus | 88.24 | 85.99 |
| AT4G21970.1 | Thale cress | nucleus | 83.01 | 80.89 |
| Bra029510.1-P | Field mustard | nucleus | 58.17 | 59.73 |
| VIT_00s1488g00010.t01 | Wine grape | cytosol | 34.64 | 53.54 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 41.83 | 47.41 |
| KRH20851 | Soybean | nucleus | 47.06 | 44.17 |
| PGSC0003DMT400042495 | Potato | nucleus | 38.56 | 38.56 |
| VIT_10s0116g01720.t01 | Wine grape | cytosol, mitochondrion, nucleus | 47.71 | 38.42 |
| Solyc02g080580.1.1 | Tomato | nucleus | 37.91 | 37.42 |
| KRH02067 | Soybean | nucleus | 45.1 | 37.3 |
| KRH51093 | Soybean | nucleus | 45.75 | 37.04 |
| Bra019080.1-P | Field mustard | nucleus | 32.68 | 33.11 |
| Bra002459.1-P | Field mustard | nucleus | 30.07 | 28.75 |
| Bra020237.1-P | Field mustard | nucleus | 30.07 | 27.71 |
| Bra009543.1-P | Field mustard | nucleus | 29.41 | 25.57 |
| Bra013574.1-P | Field mustard | cytosol | 28.76 | 25.43 |
| Bra005738.1-P | Field mustard | cytosol | 28.76 | 24.72 |
| Bra027071.1-P | Field mustard | cytosol | 29.41 | 22.73 |
| Bra019837.1-P | Field mustard | mitochondrion | 30.07 | 22.44 |
| Bra027283.1-P | Field mustard | nucleus | 30.72 | 21.86 |
| Bra021587.1-P | Field mustard | nucleus | 30.07 | 20.91 |
| Bra035703.1-P | Field mustard | cytosol | 30.07 | 18.7 |
| Bra001580.1-P | Field mustard | nucleus | 27.45 | 18.67 |
Protein Annotations
| EnsemblPlants:Bra013577.1 | EnsemblPlants:Bra013577.1-P | EnsemblPlantsGene:Bra013577 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF4 |
| PFAM:PF04520 | UniParc:UPI000254553D | UniProt:M4DAR7 | MapMan:35.2 | : | : |
Description
AT4G21970 (E=9e-066) | unknown protein
Coordinates
chrA01:+:6431264..6431725
Molecular Weight (calculated)
17061.8 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.854
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAEEFQEE EVWSVLRENE TPGPEMKMSK SNNLFSAATS SSARYIPKGK EVSKAKQSSA PMNVPDWSKI YGNTRSNHLH SWTTHDEDDD EHSMVPPHEL
101: VAKMLARTQI SSFSMCEGVG RTLKGRDLSK TRNDVLTKTG FLESNVTSTS PQP
101: VAKMLARTQI SSFSMCEGVG RTLKGRDLSK TRNDVLTKTG FLESNVTSTS PQP
001: MEGGEEFQEE EVWSVLRESE TQGPEMKMSK SNNLFSASSS SSARYIPKGN EVSGGAKQSS APMNIPDWSK VYGYSKKNTS SHLHSWAIDD DDEGSMVPPH
101: ELVAKRLART QISSFSMCEG IGRTLKGRDL SKTRNAVLTR TGFLESNITS SSTTSPP
101: ELVAKRLART QISSFSMCEG IGRTLKGRDL SKTRNAVLTR TGFLESNITS SSTTSPP
Arabidopsis Description
Protein of unknown function, DUF584 [Source:TAIR;Acc:AT4G21970]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.