Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51093 | Soybean | nucleus | 86.49 | 84.66 |
| VIT_00s1488g00010.t01 | Wine grape | cytosol | 32.43 | 60.61 |
| KRH20851 | Soybean | nucleus | 51.89 | 58.9 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 38.38 | 52.59 |
| VIT_10s0116g01720.t01 | Wine grape | cytosol, mitochondrion, nucleus | 53.51 | 52.11 |
| Bra019408.1-P | Field mustard | nucleus | 40.0 | 47.13 |
| CDX94069 | Canola | nucleus | 40.0 | 47.13 |
| CDX98721 | Canola | nucleus | 40.0 | 47.13 |
| CDX82889 | Canola | nucleus | 37.84 | 46.05 |
| AT4G21970.1 | Thale cress | nucleus | 38.92 | 45.86 |
| Bra029510.1-P | Field mustard | nucleus | 36.76 | 45.64 |
| AT4G04630.1 | Thale cress | cytosol, mitochondrion, nucleus | 41.08 | 45.24 |
| Bra013577.1-P | Field mustard | nucleus | 37.3 | 45.1 |
| CDX79115 | Canola | nucleus | 37.3 | 45.1 |
| CDY29096 | Canola | nucleus | 36.22 | 44.67 |
| CDX94568 | Canola | nucleus | 36.22 | 44.67 |
| CDY16655 | Canola | nucleus | 38.92 | 43.11 |
| PGSC0003DMT400042495 | Potato | nucleus | 34.59 | 41.83 |
| KRH33098 | Soybean | cytosol | 28.65 | 40.77 |
| Solyc02g080580.1.1 | Tomato | nucleus | 33.51 | 40.0 |
| KRH14391 | Soybean | nucleus | 40.54 | 39.47 |
| KRH73758 | Soybean | nucleus | 39.46 | 37.44 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 29.19 | 35.06 |
| KRH46190 | Soybean | cytosol | 38.92 | 33.96 |
| KRH26408 | Soybean | cytosol | 27.03 | 33.56 |
| KRH25013 | Soybean | mitochondrion | 28.11 | 30.59 |
| KRH29916 | Soybean | mitochondrion | 28.11 | 30.41 |
| KRG95986 | Soybean | nucleus | 24.32 | 29.61 |
| KRG98750 | Soybean | nucleus | 32.97 | 29.33 |
| KRH67690 | Soybean | cytosol | 25.95 | 28.92 |
| KRH11426 | Soybean | mitochondrion | 28.11 | 26.94 |
| KRH20860 | Soybean | mitochondrion | 28.11 | 26.67 |
| KRH32477 | Soybean | cytosol | 26.49 | 26.06 |
| KRH19865 | Soybean | mitochondrion | 24.86 | 25.56 |
| KRH02073 | Soybean | nucleus | 27.03 | 23.47 |
| KRH67951 | Soybean | cytosol, plastid | 27.57 | 23.39 |
| KRH51082 | Soybean | nucleus | 28.11 | 22.51 |
| KRH30402 | Soybean | nucleus | 28.11 | 22.32 |
| KRH26654 | Soybean | cytosol | 25.41 | 19.42 |
| KRH25262 | Soybean | nucleus | 25.41 | 19.42 |
| KRG96207 | Soybean | plastid | 27.03 | 18.8 |
| KRH22667 | Soybean | nucleus | 24.86 | 18.7 |
Protein Annotations
| EMBL:ACUP02010293 | EnsemblPlants:KRH02067 | EnsemblPlantsGene:GLYMA_17G013300 | EntrezGene:100810697 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF4 | PFAM:PF04520 | ProteinID:KRH02067 | ProteinID:KRH02067.1 | SEG:seg | UniParc:UPI000233EF3D |
| UniProt:K7MJF0 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:1013849..1016359
Molecular Weight (calculated)
20548.7 Da
IEP (calculated)
4.827
GRAVY (calculated)
-0.782
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MADWGGFLDQ NSGFGGGSMR NEDFDEENVW GLTMERERDF LSPKMRVSKE SYGSSSAWLV STSPRKITRT NSVTLHSLES DSDSNVVQRS SAPTSIPGWS
101: KIYGKKGVEE GVNNKKPDCG FGDHYGDDDD EDEDDMIPPH EWIARKLARS QISSFSVCEG IGRTLKGRDL SKVRNAILTK TGFIE
101: KIYGKKGVEE GVNNKKPDCG FGDHYGDDDD EDEDDMIPPH EWIARKLARS QISSFSVCEG IGRTLKGRDL SKVRNAILTK TGFIE
001: MDSLGSRRRT HNSRRVPSMG IEGDEEFQEE DVWSVLREGE TSSPEMKIPK SHFSSSSSSS SSPWNIRRSK EVSGVKQSSA PMNVPDWSKV YGDSKSNRRS
101: SHLHSHAADD DDEDDDGCMV PPHEWVARKL ARTQISSFSM CEGVGRTLKG RDLSKVRNAV LSKTGFLE
101: SHLHSHAADD DDEDDDGCMV PPHEWVARKL ARTQISSFSM CEGVGRTLKG RDLSKVRNAV LSKTGFLE
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q8LFI5]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.