Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 89.93 | 87.01 |
| Solyc06g075170.1.1 | Tomato | nucleus | 59.06 | 53.99 |
| CDY65979 | Canola | nucleus | 56.38 | 52.83 |
| KRH25013 | Soybean | mitochondrion | 59.73 | 52.35 |
| AT3G45210.1 | Thale cress | nucleus | 51.68 | 52.03 |
| Bra002459.1-P | Field mustard | nucleus | 55.7 | 51.88 |
| Bra020237.1-P | Field mustard | nucleus | 57.72 | 51.81 |
| PGSC0003DMT400062500 | Potato | nucleus | 58.39 | 50.88 |
| KRH29916 | Soybean | mitochondrion | 57.72 | 50.29 |
| AT5G60680.1 | Thale cress | nucleus | 54.36 | 49.69 |
| PGSC0003DMT400020798 | Potato | plastid | 55.03 | 48.24 |
| Solyc11g069450.1.1 | Tomato | cytosol | 55.03 | 47.4 |
| GSMUA_Achr11P... | Banana | mitochondrion | 41.61 | 43.36 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 44.3 | 40.74 |
| AT2G28400.1 | Thale cress | mitochondrion | 41.61 | 38.27 |
| CDY62461 | Canola | nucleus | 39.6 | 37.34 |
| CDX77180 | Canola | nucleus | 40.27 | 36.36 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 39.6 | 35.98 |
| KRH19865 | Soybean | mitochondrion | 42.28 | 35.0 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 42.28 | 34.81 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 42.28 | 34.81 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 42.28 | 34.81 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 41.61 | 34.64 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 40.94 | 34.27 |
| KRG95986 | Soybean | nucleus | 34.9 | 34.21 |
| KRH32477 | Soybean | cytosol | 42.95 | 34.04 |
| Os04t0520700-01 | Rice | mitochondrion | 39.6 | 33.91 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 40.27 | 33.9 |
| Zm00001d025872_P001 | Maize | mitochondrion | 40.27 | 33.33 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 39.6 | 33.15 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 37.58 | 32.37 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 38.26 | 32.2 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 39.6 | 32.07 |
| KRH67690 | Soybean | cytosol | 35.57 | 31.93 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 38.26 | 31.84 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 36.91 | 31.79 |
| EER91475 | Sorghum | mitochondrion | 40.27 | 31.58 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 36.24 | 30.68 |
| KXG26730 | Sorghum | mitochondrion | 38.93 | 30.37 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 36.24 | 30.34 |
| KRH33098 | Soybean | cytosol | 26.17 | 30.0 |
| Os02t0629000-01 | Rice | mitochondrion | 34.23 | 30.0 |
| KRH20851 | Soybean | nucleus | 32.21 | 29.45 |
| Zm00001d017287_P001 | Maize | cytosol | 32.21 | 28.24 |
| KRH11426 | Soybean | mitochondrion | 36.24 | 27.98 |
| KRH20860 | Soybean | mitochondrion | 36.24 | 27.69 |
| KRH51093 | Soybean | nucleus | 34.9 | 27.51 |
| KRH02067 | Soybean | nucleus | 33.56 | 27.03 |
| KRH02073 | Soybean | nucleus | 36.91 | 25.82 |
| KRH14391 | Soybean | nucleus | 32.89 | 25.79 |
| KRH73758 | Soybean | nucleus | 32.89 | 25.13 |
| KRH51082 | Soybean | nucleus | 36.91 | 23.81 |
| KRH67951 | Soybean | cytosol, plastid | 33.56 | 22.94 |
| KRH46190 | Soybean | cytosol | 32.21 | 22.64 |
| Bra035703.1-P | Field mustard | cytosol | 36.91 | 22.36 |
| KRH22667 | Soybean | nucleus | 34.23 | 20.73 |
| KRH30402 | Soybean | nucleus | 32.21 | 20.6 |
| KRH26654 | Soybean | cytosol | 31.54 | 19.42 |
| KRG98750 | Soybean | nucleus | 26.17 | 18.75 |
| KRG96207 | Soybean | plastid | 32.89 | 18.42 |
| KRH25262 | Soybean | nucleus | 29.53 | 18.18 |
| Os10t0481000-00 | Rice | mitochondrion | 31.54 | 15.72 |
Protein Annotations
| EMBL:ACUP02007714 | EnsemblPlants:KRH26408 | EnsemblPlantsGene:GLYMA_12G172300 | EntrezGene:100817341 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF9 | PFAM:PF04520 | ProteinID:KRH26408 | ProteinID:KRH26408.1 | UniParc:UPI0001B637FE | UniProt:A0A0R0HG12 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:32867672..32868647
Molecular Weight (calculated)
16812.3 Da
IEP (calculated)
7.776
GRAVY (calculated)
-0.868
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNIRRATYR FLPAMDTDSF SDSNFEFQES DLYNSARANS PEFRKSVRAS RFHNYSSSGG RVGTPVSLPV NVPDWSKILG DEFGRNQRRN YDEAQSDEED
101: GDGRVPPHEF LAKTGIASFS VHEGVGRTLK GRDLSRVRNA IWAKTGFQD
101: GDGRVPPHEF LAKTGIASFS VHEGVGRTLK GRDLSRVRNA IWAKTGFQD
001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
Arabidopsis Description
AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.