Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- plasma membrane 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G45210.1 | Os02t0708400-01 | AT3G27960.1 | 21798944 |
| AT3G45210.1 | Os02t0656300-01 | AT3G48150.1 | 21798944 |
| AT3G45210.1 | Os06t0679100-00 | AT3G48150.1 | 21798944 |
| AT5G03230.1 | Os01t0218200-00 | AT2G42580.1 | 19000166 |
| AT5G03230.1 | Os05t0210600-01 | AT2G42580.1 | 19000166 |
| AT5G03230.1 | Os05t0587300-01 | AT2G42580.1 | 19000166 |
| AT5G03230.1 | Os02t0182100-01 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G212800.1 | Wheat | cytosol | 68.82 | 67.63 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 67.65 | 66.47 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 68.82 | 65.73 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 66.47 | 64.2 |
| Zm00001d017287_P001 | Maize | cytosol | 60.0 | 60.0 |
| Os04t0520700-01 | Rice | mitochondrion | 56.47 | 55.17 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 43.53 | 45.12 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 35.29 | 38.96 |
| VIT_06s0004g02830.t01 | Wine grape | cytosol | 38.24 | 38.92 |
| Solyc06g075170.1.1 | Tomato | nucleus | 37.06 | 38.65 |
| PGSC0003DMT400045373 | Potato | cytosol | 32.94 | 38.1 |
| PGSC0003DMT400062500 | Potato | nucleus | 36.47 | 36.26 |
| AT5G03230.1 | Thale cress | nucleus | 35.29 | 36.14 |
| Solyc09g007790.1.1 | Tomato | cytosol | 33.53 | 36.08 |
| VIT_08s0040g01860.t01 | Wine grape | cytosol | 34.71 | 35.98 |
| Solyc11g069450.1.1 | Tomato | cytosol | 36.47 | 35.84 |
| AT5G60680.1 | Thale cress | nucleus | 34.12 | 35.58 |
| PGSC0003DMT400020798 | Potato | plastid | 35.29 | 35.29 |
| KRH29916 | Soybean | mitochondrion | 34.71 | 34.5 |
| KRH26408 | Soybean | cytosol | 30.0 | 34.23 |
| Solyc10g086110.1.1 | Tomato | cytosol | 31.76 | 34.18 |
| KRH25013 | Soybean | mitochondrion | 34.12 | 34.12 |
| CDY65979 | Canola | nucleus | 31.76 | 33.96 |
| PGSC0003DMT400055482 | Potato | cytosol | 31.76 | 33.75 |
| Bra002459.1-P | Field mustard | nucleus | 31.18 | 33.12 |
| AT3G45210.1 | Thale cress | nucleus | 28.82 | 33.11 |
| CDX70321 | Canola | nucleus | 33.53 | 32.39 |
| CDY10396 | Canola | nucleus | 33.53 | 32.39 |
| KRG95986 | Soybean | nucleus | 28.82 | 32.24 |
| Bra020237.1-P | Field mustard | nucleus | 31.18 | 31.93 |
| CDX80857 | Canola | cytosol | 33.53 | 31.84 |
| Bra009543.1-P | Field mustard | nucleus | 32.94 | 31.82 |
| CDY62461 | Canola | nucleus | 29.41 | 31.65 |
| AT2G28400.1 | Thale cress | mitochondrion | 30.0 | 31.48 |
| CDY11244 | Canola | cytosol | 32.94 | 31.46 |
| Bra005738.1-P | Field mustard | cytosol | 32.94 | 31.46 |
| KRH67690 | Soybean | cytosol | 30.59 | 31.33 |
| KRH19865 | Soybean | mitochondrion | 32.94 | 31.11 |
| CDX77180 | Canola | nucleus | 29.41 | 30.3 |
| KRH32477 | Soybean | cytosol | 31.76 | 28.72 |
| Os11t0154300-01 | Rice | cytosol, mitochondrion, plastid | 25.29 | 25.15 |
| Os04t0542000-01 | Rice | cytosol, nucleus, plastid | 30.0 | 24.4 |
| Os03t0113900-02 | Rice | cytosol, mitochondrion, plastid | 28.24 | 24.37 |
| Os01t0862600-01 | Rice | nucleus | 30.59 | 23.74 |
| Os04t0413900-01 | Rice | nucleus | 30.0 | 20.82 |
| Os07t0516300-01 | Rice | mitochondrion | 23.53 | 20.41 |
| Bra035703.1-P | Field mustard | cytosol | 27.65 | 19.11 |
| Os12t0156000-00 | Rice | nucleus | 20.0 | 12.06 |
| Os10t0481000-00 | Rice | mitochondrion | 21.18 | 12.04 |
Protein Annotations
| EMBL:AK062480 | EnsemblPlants:Os02t0629000-01 | EnsemblPlantsGene:Os02g0629000 | EntrezGene:4330048 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF17 | PFAM:PF04520 | ProteinID:BAD23731.1 | ProteinID:BAF09404.1 | ProteinID:BAS79883.1 | RefSeq:XP_015624025.1 |
| SEG:seg | UniParc:UPI00003B0726 | UniProt:Q6K219 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF584 family protein. (Os02t0629000-01)
Coordinates
chr2:-:25153298..25154265
Molecular Weight (calculated)
18055.7 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.578
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSTRSAAT EQAYSRFAPT AASSRGRGVG GGNGFDEFDE SDIWGSFEPA AEVAESPRAA RHQVPAARPP GRKAAAAASK PAAHGSLPVN IPDWSKILGD
101: EYRGHHAGDW EADDVDDDDI DAASAVAVLP PHELAWRRRA ASLSVHEDGM GIGRTLKVRD AVWKKTGFQA
101: EYRGHHAGDW EADDVDDDDI DAASAVAVLP PHELAWRRRA ASLSVHEDGM GIGRTLKVRD AVWKKTGFQA
001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
Arabidopsis Description
AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.