Factsheet for Solyc09g007790.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055482	Potato	cytosol	92.41	91.25
VIT_08s0040g01860.t01	Wine grape	cytosol	52.53	50.61
Solyc06g075170.1.1	Tomato	nucleus	48.73	47.24
Solyc10g086110.1.1	Tomato	cytosol	46.84	46.84
KRG95986	Soybean	nucleus	43.67	45.39
Solyc11g069450.1.1	Tomato	cytosol	46.84	42.77
Solyc10g083260.1.1	Tomato	nucleus	19.62	41.89
GSMUA_Achr11P...	Banana	mitochondrion	37.34	41.26
KRH67690	Soybean	cytosol	43.04	40.96
KRH32477	Soybean	cytosol	48.1	40.43
KRH19865	Soybean	mitochondrion	45.57	40.0
GSMUA_Achr8P18920_001	Banana	cytosol, mitochondrion	39.24	38.27
Os04t0520700-01	Rice	mitochondrion	39.24	35.63
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	36.71	35.37
Os02t0629000-01	Rice	mitochondrion	36.08	33.53
Zm00001d003009_P001	Maize	mitochondrion, nucleus	37.97	32.61
TraesCS2A01G380100.1	Wheat	mitochondrion	36.08	32.02
TraesCS1D01G155400.1	Wheat	mitochondrion	36.08	31.49
TraesCS1B01G174100.1	Wheat	mitochondrion	36.08	31.49
TraesCS1A01G157900.1	Wheat	mitochondrion	36.08	31.49
TraesCS2B01G397000.1	Wheat	mitochondrion	35.44	31.46
HORVU1Hr1G041890.1	Barley	mitochondrion	35.44	31.28
Zm00001d017287_P001	Maize	cytosol	33.54	31.18
TraesCS2D01G376300.1	Wheat	mitochondrion	34.81	31.07
KXG26730	Sorghum	mitochondrion	37.34	30.89
HORVU0Hr1G005210.2	Barley	cytosol, plastid	34.18	30.51
Solyc07g064650.1.1	Tomato	nucleus	34.18	30.34
Zm00001d014007_P001	Maize	cytosol, plastid	34.18	30.17
TraesCS6D01G212800.1	Wheat	cytosol	32.91	30.06
HORVU0Hr1G016350.1	Barley	cytosol, mitochondrion, nucleus, plastid	33.54	29.78
TraesCS6B01G258900.1	Wheat	nucleus	32.28	29.48
EER91475	Sorghum	mitochondrion	35.44	29.47
Zm00001d025872_P001	Maize	mitochondrion	33.54	29.44
Solyc02g080580.1.1	Tomato	nucleus	28.48	29.03
TraesCS6A01G222200.1	Wheat	cytosol	32.28	28.98
Solyc02g080510.1.1	Tomato	mitochondrion	34.18	26.21
Solyc02g032800.1.1	Tomato	nucleus	34.81	25.58
Solyc03g082610.1.1	Tomato	plastid	29.75	22.71
Solyc09g010140.1.1	Tomato	cytosol	29.11	19.17
Os10t0481000-00	Rice	mitochondrion	25.32	13.38
Solyc06g074260.2.1	Tomato	cytosol	25.95	10.62

Protein Annotations

EnsemblPlants:Solyc09g007790.1.1	EnsemblPlantsGene:Solyc09g007790.1	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF4	PFAM:PF04520
SEG:seg	UniParc:UPI000276BAF8	UniProt:K4CQG8	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr9:+:1315444..1315920

Molecular Weight (calculated)

17858.2 Da

IEP (calculated)

7.691

GRAVY (calculated)

-0.672

Length

158 amino acids

Sequence
(BLAST)

001: MATTRKTKNF LFLGGKDKIT PLPSSTNTLQ FEFDEAEMWS NSEEINNVEP KLSIPSSRLS KKMTKKGERK AINATSLPVN IPDWSKILGD DEKGILGKNI
101: MFDDDGDFDD ENRIPPHEYL ARTRVASFSV HEGIGRTLKG RDLSIVRNAI WKKIGFED

Best Arabidopsis Sequence Match ( AT3G45210.1 )
(BLAST)

001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD

Arabidopsis Description

AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.