Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045373 | Potato | cytosol | 77.85 | 83.67 |
| Solyc09g007790.1.1 | Tomato | cytosol | 46.84 | 46.84 |
| Solyc06g075170.1.1 | Tomato | nucleus | 47.47 | 46.01 |
| Solyc10g083260.1.1 | Tomato | nucleus | 20.89 | 44.59 |
| VIT_08s0040g01860.t01 | Wine grape | cytosol | 43.67 | 42.07 |
| Solyc11g069450.1.1 | Tomato | cytosol | 45.57 | 41.62 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.34 | 41.26 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 38.61 | 37.2 |
| KRG95986 | Soybean | nucleus | 35.44 | 36.84 |
| KRH67690 | Soybean | cytosol | 38.61 | 36.75 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 37.34 | 36.42 |
| Os04t0520700-01 | Rice | mitochondrion | 38.61 | 35.06 |
| KRH19865 | Soybean | mitochondrion | 39.87 | 35.0 |
| Solyc07g064650.1.1 | Tomato | nucleus | 36.71 | 32.58 |
| KRH32477 | Soybean | cytosol | 38.61 | 32.45 |
| Solyc02g080580.1.1 | Tomato | nucleus | 31.65 | 32.26 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 36.08 | 32.02 |
| Os02t0629000-01 | Rice | mitochondrion | 34.18 | 31.76 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 35.44 | 31.64 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 35.44 | 31.28 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 34.81 | 31.07 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 36.08 | 30.98 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 35.44 | 30.94 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 35.44 | 30.94 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 34.81 | 30.9 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 33.54 | 30.64 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 34.81 | 30.39 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 34.18 | 30.34 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 32.91 | 30.06 |
| EER91475 | Sorghum | mitochondrion | 36.08 | 30.0 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 33.54 | 29.61 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 32.91 | 29.55 |
| Zm00001d017287_P001 | Maize | cytosol | 31.65 | 29.41 |
| KXG26730 | Sorghum | mitochondrion | 35.44 | 29.32 |
| Zm00001d025872_P001 | Maize | mitochondrion | 32.28 | 28.33 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 34.18 | 26.21 |
| Solyc02g032800.1.1 | Tomato | nucleus | 35.44 | 26.05 |
| Solyc03g082610.1.1 | Tomato | plastid | 30.38 | 23.19 |
| Solyc09g010140.1.1 | Tomato | cytosol | 33.54 | 22.08 |
| Solyc06g074260.2.1 | Tomato | cytosol | 30.38 | 12.44 |
| Os10t0481000-00 | Rice | mitochondrion | 23.42 | 12.37 |
Protein Annotations
| EnsemblPlants:Solyc10g086110.1.1 | EnsemblPlantsGene:Solyc10g086110.1 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF4 | PFAM:PF04520 |
| SEG:seg | UniParc:UPI0002769356 | UniProt:K4D445 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr10:+:65056377..65056853
Molecular Weight (calculated)
17839.7 Da
IEP (calculated)
5.084
GRAVY (calculated)
-0.848
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRKNFQFL ASMELKTSSD DLIFEFDESD IWDNTTNVVS HHSEPKRLIP TPRSSRKSPS PSPPSPSLAR SLPVNIPDWS KVQGDKNKNE AIQDKEEVDI
101: QDKEEVDADD DTWIPPHEYL AKKRGASFSV CEGVGRTLKG RDLSRLRDAI LKQTGFID
101: QDKEEVDADD DTWIPPHEYL AKKRGASFSV CEGVGRTLKG RDLSRLRDAI LKQTGFID
001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
Arabidopsis Description
AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.