Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g086110.1.1 | Tomato | cytosol | 83.67 | 77.85 |
| PGSC0003DMT400055482 | Potato | cytosol | 53.74 | 49.38 |
| PGSC0003DMT400062500 | Potato | nucleus | 51.02 | 43.86 |
| GSMUA_Achr11P... | Banana | mitochondrion | 42.18 | 43.36 |
| VIT_08s0040g01860.t01 | Wine grape | cytosol | 48.3 | 43.29 |
| PGSC0003DMT400020798 | Potato | plastid | 49.66 | 42.94 |
| KRG95986 | Soybean | nucleus | 41.5 | 40.13 |
| KRH67690 | Soybean | cytosol | 43.54 | 38.55 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 42.18 | 38.27 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 42.18 | 37.8 |
| KRH19865 | Soybean | mitochondrion | 45.58 | 37.22 |
| Os04t0520700-01 | Rice | mitochondrion | 43.54 | 36.78 |
| KRH32477 | Soybean | cytosol | 44.9 | 35.11 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 42.18 | 34.83 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 40.82 | 33.9 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 40.82 | 33.71 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 40.14 | 33.33 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 41.5 | 33.15 |
| Os02t0629000-01 | Rice | mitochondrion | 38.1 | 32.94 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 39.46 | 32.4 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 39.46 | 32.04 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 39.46 | 32.04 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 39.46 | 32.04 |
| Zm00001d025872_P001 | Maize | mitochondrion | 38.1 | 31.11 |
| EER91475 | Sorghum | mitochondrion | 40.14 | 31.05 |
| KXG26730 | Sorghum | mitochondrion | 40.14 | 30.89 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 37.41 | 30.73 |
| PGSC0003DMT400042495 | Potato | nucleus | 31.97 | 30.72 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 36.05 | 30.64 |
| Zm00001d017287_P001 | Maize | cytosol | 35.37 | 30.59 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 36.73 | 30.34 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 35.37 | 30.06 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 35.37 | 29.55 |
| PGSC0003DMT400057474 | Potato | nucleus | 37.41 | 28.35 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 38.1 | 27.05 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 36.05 | 26.63 |
| PGSC0003DMT400090902 | Potato | cytosol, plastid | 33.33 | 23.67 |
| PGSC0003DMT400072600 | Potato | nucleus | 37.41 | 22.82 |
| PGSC0003DMT400015061 | Potato | cytosol, mitochondrion, nucleus, plastid | 32.65 | 21.62 |
| PGSC0003DMT400023089 | Potato | cytosol | 34.01 | 20.83 |
| Os10t0481000-00 | Rice | mitochondrion | 26.53 | 13.04 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400045373 | EnsemblPlantsGene:PGSC0003DMG400017606 | EntrezGene:102595296 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF9 |
| PFAM:PF04520 | PGSC:PGSC0003DMG400017606 | RefSeq:XP_006363694.1 | SEG:seg | UniParc:UPI000296590B | UniProt:M1BHK2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400017606]
Coordinates
chr10:-:52095476..52095919
Molecular Weight (calculated)
16788.7 Da
IEP (calculated)
9.002
GRAVY (calculated)
-0.950
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRKNFQFL GSMDKKTSSD DLLFEFDESD IWENTTNIIS HHSESKRLIP TSRISKRSPS PPPSPPPARS LPINIPDWSK ILGDKKKNDD IRDKEEVDAD
101: TWIPPHEYLA KKRGASFSVH EGVGRTLKGR DLSRVRDAIW KQTGFED
101: TWIPPHEYLA KKRGASFSVH EGVGRTLKGR DLSRVRDAIW KQTGFED
001: MASRKLFFVK PKYIYPEPKP EMSDENVFEF DESDIHNLGD HQLPNSFDAK RSISISRLRR KPTKTGDSGN REITKTGSLP VNIPDWSKIL KSEYRGHAIP
101: DDDSDDDDED DDDSNDGGRR MIPPHEYLAR RRGSSFTVHE GIGGTAKGRD LRRLRNAIWE KIGFQD
101: DDDSDDDDED DDDSNDGGRR MIPPHEYLAR RRGSSFTVHE GIGGTAKGRD LRRLRNAIWE KIGFQD
Arabidopsis Description
Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LYW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.