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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1
TraesCS6A01G146200.3
TraesCS6A01G251400.1
TraesCS6A01G274500.1
TraesCS6B01G174400.1
TraesCS6B01G273900.1
TraesCS6B01G302000.1
TraesCS6D01G135500.3
TraesCS6D01G233200.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G45210.1 TraesCS6A01G274500.1 AT3G27960.1 21798944
AT3G45210.1 TraesCS6B01G302000.1 AT3G27960.1 21798944
AT3G45210.1 TraesCS6D01G254800.1 AT3G27960.1 21798944
AT3G45210.1 TraesCS6A01G251400.1 AT3G48150.1 21798944
AT3G45210.1 TraesCS6B01G273900.1 AT3G48150.1 21798944
AT3G45210.1 TraesCS6D01G233200.1 AT3G48150.1 21798944
AT5G03230.1 TraesCS1A01G427400.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS1B01G462300.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS1D01G437100.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3A01G143000.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3A01G221800.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3B01G162100.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3B01G251600.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3D01G144600.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS3D01G231300.1 AT2G42580.1 19000166
AT5G03230.1 TraesCS6A01G146200.3 AT4G31920.1 18642946
AT5G03230.1 TraesCS6B01G174400.1 AT4G31920.1 18642946
AT5G03230.1 TraesCS6D01G135500.3 AT4G31920.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G157900.1 Wheat mitochondrion 98.89 98.89
TraesCS1B01G174100.1 Wheat mitochondrion 96.69 96.69
HORVU1Hr1G041890.1 Barley mitochondrion 95.58 96.65
Zm00001d014007_P001 Maize cytosol, plastid 60.77 61.45
EER91475 Sorghum mitochondrion 62.43 59.47
GSMUA_Achr11P... Banana mitochondrion 37.02 46.85
Solyc06g075170.1.1 Tomato nucleus 38.67 42.94
KRH22888 Soybean cytosol, mitochondrion, nucleus 36.46 42.86
GSMUA_Achr8P18920_001 Banana cytosol, mitochondrion 38.12 42.59
KRH26408 Soybean cytosol 34.81 42.28
VIT_06s0004g02830.t01 Wine grape cytosol 38.67 41.92
PGSC0003DMT400062500 Potato nucleus 38.12 40.35
PGSC0003DMT400045373 Potato cytosol 32.04 39.46
CDY62461 Canola nucleus 33.15 37.97
AT2G28400.1 Thale cress mitochondrion 33.7 37.65
PGSC0003DMT400020798 Potato plastid 35.36 37.65
CDX77180 Canola nucleus 34.25 37.58
Solyc11g069450.1.1 Tomato cytosol 35.36 36.99
TraesCS6D01G212800.1 Wheat cytosol 35.36 36.99
TraesCS5D01G134900.1 Wheat cytosol 32.04 36.94
PGSC0003DMT400055482 Potato cytosol 32.6 36.88
Bra002459.1-P Field mustard nucleus 32.6 36.88
KRG95986 Soybean nucleus 30.94 36.84
Bra020237.1-P Field mustard nucleus 33.7 36.75
AT5G03230.1 Thale cress nucleus 33.7 36.75
VIT_08s0040g01860.t01 Wine grape cytosol 33.15 36.59
AT3G45210.1 Thale cress nucleus 29.83 36.49
CDY65979 Canola nucleus 32.04 36.48
KRH25013 Soybean mitochondrion 34.25 36.47
AT5G60680.1 Thale cress nucleus 32.6 36.2
TraesCS2D01G376300.1 Wheat mitochondrion 35.36 36.16
Solyc09g007790.1.1 Tomato cytosol 31.49 36.08
KRH29916 Soybean mitochondrion 33.7 35.67
Solyc10g086110.1.1 Tomato cytosol 30.94 35.44
KRH67690 Soybean cytosol 32.04 34.94
CDY10396 Canola nucleus 33.7 34.66
CDX70321 Canola nucleus 33.7 34.66
KRH19865 Soybean mitochondrion 34.25 34.44
Bra009543.1-P Field mustard nucleus 33.15 34.09
CDY11244 Canola cytosol 32.6 33.15
Bra005738.1-P Field mustard cytosol 32.6 33.15
KRH32477 Soybean cytosol 34.25 32.98
CDX80857 Canola cytosol 32.04 32.4
TraesCS2D01G228500.1 Wheat cytosol, mitochondrion, nucleus, plastid 29.28 31.36
Os10t0481000-00 Rice mitochondrion 47.51 28.76
TraesCS2D01G387500.1 Wheat cytosol, nucleus, plastid 31.49 28.22
TraesCS3D01G367800.1 Wheat nucleus 31.49 26.89
TraesCS2D01G266500.1 Wheat mitochondrion, nucleus 23.76 24.16
Bra035703.1-P Field mustard cytosol 31.49 23.17
TraesCS2D01G293600.1 Wheat nucleus 29.83 22.5
Protein Annotations
EnsemblPlants:TraesCS1D01G155400.1EnsemblPlantsGene:TraesCS1D01G155400InterPro:Senescence_reg_S40PANTHER:PTHR33083PANTHER:PTHR33083:SF9PFAM:PF04520
SEG:segMapMan:35.2::::
Description
No Description!
Coordinates
chr1D:-:218409294..218410523
Molecular Weight (calculated)
19022.1 Da
IEP (calculated)
10.173
GRAVY (calculated)
-0.575
Length
181 amino acids
Sequence
(BLAST)
001: MAGRSSSRSM VSAHRLFAPA PARTLQHAAD PALELDEADI IWGGAALASS PPADAYGRAL STSTPSRASK PRAAAPRDAA GGGGGVGGPA SLPVNIPDWS
101: KILGSEYGGG SAGAGRWPSD DRGDAYLDRG DRQWVPPHEQ LMYRERAAAS FSVREGAGRT LKGRDLRRVR NAIWEKTGFQ D
Best Arabidopsis Sequence Match ( AT5G03230.1 )
(BLAST)
001: MASRKLFFVK PKYIYPEPKP EMSDENVFEF DESDIHNLGD HQLPNSFDAK RSISISRLRR KPTKTGDSGN REITKTGSLP VNIPDWSKIL KSEYRGHAIP
101: DDDSDDDDED DDDSNDGGRR MIPPHEYLAR RRGSSFTVHE GIGGTAKGRD LRRLRNAIWE KIGFQD
Arabidopsis Description
Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LYW2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.