Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020237.1-P | Field mustard | nucleus | 79.14 | 77.71 |
| AT3G45210.1 | Thale cress | nucleus | 58.9 | 64.86 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 53.99 | 57.14 |
| PGSC0003DMT400020798 | Potato | plastid | 59.51 | 57.06 |
| Solyc06g075170.1.1 | Tomato | nucleus | 57.06 | 57.06 |
| Solyc11g069450.1.1 | Tomato | cytosol | 58.28 | 54.91 |
| KRH26408 | Soybean | cytosol | 49.69 | 54.36 |
| PGSC0003DMT400062500 | Potato | nucleus | 56.44 | 53.8 |
| GSMUA_Achr11P... | Banana | mitochondrion | 39.26 | 44.76 |
| AT5G03230.1 | Thale cress | nucleus | 44.17 | 43.37 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 40.49 | 40.74 |
| AT2G28400.1 | Thale cress | mitochondrion | 39.26 | 39.51 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 38.65 | 38.41 |
| Os04t0520700-01 | Rice | mitochondrion | 38.04 | 35.63 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 37.42 | 34.46 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 37.42 | 34.27 |
| Os02t0629000-01 | Rice | mitochondrion | 35.58 | 34.12 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 36.81 | 33.9 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 36.81 | 33.71 |
| Zm00001d025872_P001 | Maize | mitochondrion | 36.81 | 33.33 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 37.42 | 33.15 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 36.2 | 32.96 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 36.2 | 32.6 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 36.2 | 32.6 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 36.2 | 32.6 |
| KXG26730 | Sorghum | mitochondrion | 36.81 | 31.41 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 34.36 | 31.28 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 33.74 | 31.25 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 33.13 | 31.21 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 33.74 | 30.9 |
| EER91475 | Sorghum | mitochondrion | 35.58 | 30.53 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 31.9 | 30.06 |
| AT4G04630.1 | Thale cress | cytosol, mitochondrion, nucleus | 30.67 | 29.76 |
| AT4G21930.1 | Thale cress | cytosol | 32.52 | 28.96 |
| Zm00001d017287_P001 | Maize | cytosol | 30.06 | 28.82 |
| AT4G21970.1 | Thale cress | nucleus | 27.61 | 28.66 |
| AT1G11700.1 | Thale cress | nucleus | 34.36 | 27.86 |
| AT4G26950.1 | Thale cress | nucleus | 24.54 | 27.78 |
| AT1G61930.1 | Thale cress | cytosol | 34.36 | 27.59 |
| AT3G15040.1 | Thale cress | nucleus | 30.67 | 20.58 |
| Os10t0481000-00 | Rice | mitochondrion | 25.15 | 13.71 |
Protein Annotations
| MapMan:35.2 | EntrezGene:836189 | UniProt:A0A178URJ1 | ProteinID:AED97366.1 | ArrayExpress:AT5G60680 | EnsemblPlantsGene:AT5G60680 |
| RefSeq:AT5G60680 | TAIR:AT5G60680 | RefSeq:AT5G60680-TAIR-G | EnsemblPlants:AT5G60680.1 | TAIR:AT5G60680.1 | EMBL:AY063871 |
| EMBL:AY091231 | ProteinID:BAB09841.1 | RefSeq:NP_200876.1 | ProteinID:OAO96285.1 | PFAM:PF04520 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR33083 | PANTHER:PTHR33083:SF9 | UniProt:Q9FF51 | InterPro:Senescence_reg_S40 | UniParc:UPI000009D74C | SEG:seg |
Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FF51]
Coordinates
chr5:+:24386010..24387304
Molecular Weight (calculated)
18227.7 Da
IEP (calculated)
5.314
GRAVY (calculated)
-0.898
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGKSYYAR PSYRFLGTDQ PSYFTASDSG LEFDESDLFN PIHSDSPDFC RKISSSVRSG KKSSNRPSAA SSAAAASSLP VNVPDWSKIL RGEYRDNRRR
101: SIEDNDDDDD DNEDGGDWLP PHEFLAKTRM ASFSVHEGVG RTLKGRDLSR VRNAIFEKFG FQD
101: SIEDNDDDDD DNEDGGDWLP PHEFLAKTRM ASFSVHEGVG RTLKGRDLSR VRNAIFEKFG FQD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.