Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77180 | Canola | nucleus | 98.73 | 94.55 |
| AT2G28400.1 | Thale cress | mitochondrion | 83.54 | 81.48 |
| Bra035703.1-P | Field mustard | cytosol | 92.41 | 59.35 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 39.24 | 40.26 |
| CDY65979 | Canola | nucleus | 40.51 | 40.25 |
| KRH26408 | Soybean | cytosol | 37.34 | 39.6 |
| PGSC0003DMT400020798 | Potato | plastid | 41.14 | 38.24 |
| Solyc11g069450.1.1 | Tomato | cytosol | 41.14 | 37.57 |
| Solyc06g075170.1.1 | Tomato | nucleus | 38.61 | 37.42 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.28 | 35.66 |
| PGSC0003DMT400062500 | Potato | nucleus | 37.97 | 35.09 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 37.97 | 33.15 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 37.97 | 33.15 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 37.34 | 32.96 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 37.34 | 32.96 |
| Os04t0520700-01 | Rice | mitochondrion | 36.08 | 32.76 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 33.54 | 32.72 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 37.34 | 32.6 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.54 | 32.32 |
| Zm00001d025872_P001 | Maize | mitochondrion | 36.71 | 32.22 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 35.44 | 31.64 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 35.44 | 31.46 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 35.44 | 31.46 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 35.44 | 30.43 |
| EER91475 | Sorghum | mitochondrion | 36.08 | 30.0 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 33.54 | 29.94 |
| CDX82889 | Canola | nucleus | 28.48 | 29.61 |
| Os02t0629000-01 | Rice | mitochondrion | 31.65 | 29.41 |
| CDX79115 | Canola | nucleus | 28.48 | 29.41 |
| CDY29096 | Canola | nucleus | 27.85 | 29.33 |
| CDX94568 | Canola | nucleus | 27.85 | 29.33 |
| CDX98721 | Canola | nucleus | 29.11 | 29.3 |
| KXG26730 | Sorghum | mitochondrion | 34.81 | 28.8 |
| CDY16655 | Canola | nucleus | 30.38 | 28.74 |
| CDX94069 | Canola | nucleus | 28.48 | 28.66 |
| Zm00001d017287_P001 | Maize | cytosol | 30.38 | 28.24 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 31.01 | 27.53 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 29.75 | 27.17 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 29.75 | 26.7 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 28.48 | 26.01 |
| CDX70321 | Canola | nucleus | 28.48 | 25.57 |
| CDY10396 | Canola | nucleus | 28.48 | 25.57 |
| CDY46674 | Canola | nucleus | 24.05 | 25.33 |
| CDY11244 | Canola | cytosol | 28.48 | 25.28 |
| CDX80857 | Canola | cytosol | 28.48 | 25.14 |
| CDX82885 | Canola | nucleus | 27.22 | 24.86 |
| CDX79110 | Canola | nucleus | 27.22 | 24.86 |
| CDX92790 | Canola | nucleus | 23.42 | 24.83 |
| CDX97628 | Canola | nucleus | 31.65 | 23.15 |
| CDY12918 | Canola | cytosol | 28.48 | 22.73 |
| CDY20098 | Canola | nucleus | 29.11 | 22.33 |
| CDY19509 | Canola | cytosol | 27.85 | 22.22 |
| CDY68595 | Canola | nucleus | 30.38 | 22.22 |
| CDX97979 | Canola | mitochondrion | 28.48 | 22.06 |
| CDY49797 | Canola | mitochondrion | 28.48 | 21.95 |
| CDY34631 | Canola | nucleus | 27.85 | 21.89 |
| CDX82452 | Canola | nucleus | 31.01 | 21.78 |
| CDY32323 | Canola | nucleus | 27.85 | 21.26 |
| CDX75803 | Canola | nucleus | 30.38 | 20.34 |
| Os10t0481000-00 | Rice | mitochondrion | 27.85 | 14.72 |
Protein Annotations
| EnsemblPlants:CDY62461 | EnsemblPlantsGene:GSBRNA2T00036303001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF9 | PFAM:PF04520 |
| ProteinID:CDY62461 | ProteinID:CDY62461.1 | UniParc:UPI0004EE5B55 | UniProt:A0A078J771 | MapMan:35.2 | : |
Description
BnaA04g28420DBnaA04g28420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J771]
Coordinates
chrLK034147:+:35999..36475
Molecular Weight (calculated)
17526.1 Da
IEP (calculated)
6.678
GRAVY (calculated)
-0.799
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSKCYYPR PSHRFFSTDH QHVSSPSDFE LDEWDLFNTG SDSASGFTFS DLTITSDRTG ANRKPRGGSA ASSLPVNVPD WSKILGEESP RRQTSNEEYD
101: GDEVAACGGE TRRVPPHELI ASRRMASFSV HEGAGRTLKG RDLSRVRNTI FKIRGIED
101: GDEVAACGGE TRRVPPHELI ASRRMASFSV HEGAGRTLKG RDLSRVRNTI FKIRGIED
001: MATSKCYYPR PSHRFFTTDQ HVTATSDFEL DEWDLFNTGS DSSSSFSFSD LTITSGRTGT NRQIHGGSDS GKAASSLPVN VPDWSKILGD ESRRQRKISN
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
Arabidopsis Description
Uncharacterized protein At2g28400 [Source:UniProtKB/TrEMBL;Acc:Q9SKN0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.