Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019837.1-P | Field mustard | mitochondrion | 99.51 | 99.02 |
| CDY49797 | Canola | mitochondrion | 97.55 | 97.07 |
| AT1G11700.1 | Thale cress | nucleus | 86.27 | 87.56 |
| CDY34631 | Canola | nucleus | 79.9 | 81.09 |
| CDY12918 | Canola | cytosol | 66.18 | 68.18 |
| CDY19509 | Canola | cytosol | 64.71 | 66.67 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 50.0 | 49.51 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 48.04 | 49.25 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 49.51 | 48.79 |
| Solyc02g032800.1.1 | Tomato | nucleus | 50.0 | 47.44 |
| CDX79110 | Canola | nucleus | 37.75 | 44.51 |
| CDX82885 | Canola | nucleus | 37.25 | 43.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.76 | 41.21 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 35.78 | 39.89 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 16.67 | 39.53 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 34.31 | 39.33 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 33.33 | 38.64 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 34.31 | 38.46 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 33.82 | 38.33 |
| EER97815 | Sorghum | mitochondrion | 29.9 | 36.31 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 29.41 | 35.5 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.92 | 34.91 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.92 | 34.91 |
| CDY65979 | Canola | nucleus | 24.02 | 30.82 |
| CDX79115 | Canola | nucleus | 22.55 | 30.07 |
| CDY29096 | Canola | nucleus | 22.06 | 30.0 |
| CDX94568 | Canola | nucleus | 22.06 | 30.0 |
| CDX94069 | Canola | nucleus | 23.04 | 29.94 |
| CDX98721 | Canola | nucleus | 23.04 | 29.94 |
| Zm00001d006489_P001 | Maize | mitochondrion | 27.45 | 29.17 |
| Os07t0516300-01 | Rice | mitochondrion | 27.94 | 29.08 |
| CDX82889 | Canola | nucleus | 21.57 | 28.95 |
| CDY62461 | Canola | nucleus | 22.06 | 28.48 |
| EER99449 | Sorghum | mitochondrion | 26.96 | 28.35 |
| Zm00001d021627_P001 | Maize | mitochondrion | 25.98 | 28.19 |
| CDX92790 | Canola | nucleus | 20.59 | 28.19 |
| CDY16655 | Canola | nucleus | 23.04 | 28.14 |
| CDY46674 | Canola | nucleus | 20.59 | 28.0 |
| CDX77180 | Canola | nucleus | 22.55 | 27.88 |
| CDY10396 | Canola | nucleus | 24.02 | 27.84 |
| CDX70321 | Canola | nucleus | 24.02 | 27.84 |
| CDY11244 | Canola | cytosol | 23.53 | 26.97 |
| CDX80857 | Canola | cytosol | 23.04 | 26.26 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 21.08 | 25.15 |
| CDX97628 | Canola | nucleus | 26.47 | 25.0 |
| CDY68595 | Canola | nucleus | 25.98 | 24.54 |
| CDY32323 | Canola | nucleus | 24.51 | 24.15 |
| CDY20098 | Canola | nucleus | 23.53 | 23.3 |
| CDX82452 | Canola | nucleus | 25.49 | 23.11 |
| HORVU2Hr1G046550.2 | Barley | plastid | 23.04 | 22.71 |
| CDX75803 | Canola | nucleus | 25.49 | 22.03 |
Protein Annotations
| EnsemblPlants:CDX97979 | EnsemblPlantsGene:GSBRNA2T00105333001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 |
| ProteinID:CDX97979 | ProteinID:CDX97979.1 | SEG:seg | UniParc:UPI0004EE7778 | MapMan:35.2 | : |
Description
BnaA06g07300D
Coordinates
chrLK031902:+:335212..336021
Molecular Weight (calculated)
22031.3 Da
IEP (calculated)
4.995
GRAVY (calculated)
-0.737
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVRKLTIS QSERYLGSSY SFGDSNGNSV TDESELTEED VWSHAVDHSP EDTPESFGAW SSRDAVMRNG RVCGGLSLAF EDMSSSPTIV HQIRGGGEVG
101: GGEVGGGGGG QAPRQLASSA PVNVPDWSKI YRVNSVESIH ESEEEEDEES GMMPPHEYLA KSQKRRSRKS GGGASVFEGV GKTLKGRELR RVRDAIWSQT
201: GFYG
101: GGEVGGGGGG QAPRQLASSA PVNVPDWSKI YRVNSVESIH ESEEEEDEES GMMPPHEYLA KSQKRRSRKS GGGASVFEGV GKTLKGRELR RVRDAIWSQT
201: GFYG
001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G
Arabidopsis Description
At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.