Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00240_001 | Banana | extracellular | 18.71 | 37.21 |
| GSMUA_Achr11P... | Banana | cytosol | 21.05 | 32.43 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.58 | 31.95 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 31.58 | 31.95 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.58 | 31.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.87 | 31.88 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 24.56 | 31.11 |
| EER99449 | Sorghum | mitochondrion | 35.09 | 30.93 |
| Zm00001d021627_P001 | Maize | mitochondrion | 33.33 | 30.32 |
| Zm00001d006489_P001 | Maize | mitochondrion | 33.92 | 30.21 |
| GSMUA_Achr6P06990_001 | Banana | mitochondrion, nucleus | 29.82 | 30.18 |
| GSMUA_Achr11P... | Banana | mitochondrion | 25.15 | 30.07 |
| Os07t0516300-01 | Rice | mitochondrion | 33.92 | 29.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.99 | 29.12 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 30.99 | 28.96 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 32.16 | 28.5 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 29.24 | 27.47 |
| EER97815 | Sorghum | mitochondrion | 26.9 | 27.38 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 28.66 | 27.22 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 28.07 | 26.97 |
| KRH11426 | Soybean | mitochondrion | 30.41 | 26.94 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 27.49 | 26.7 |
| CDX79110 | Canola | nucleus | 26.9 | 26.59 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 25.15 | 26.22 |
| KRH20860 | Soybean | mitochondrion | 29.82 | 26.15 |
| Bra013574.1-P | Field mustard | cytosol | 26.32 | 26.01 |
| CDX82885 | Canola | nucleus | 25.73 | 25.43 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 31.58 | 25.35 |
| AT4G21930.1 | Thale cress | cytosol | 26.9 | 25.14 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 28.07 | 24.12 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 22.81 | 24.07 |
| KRH02073 | Soybean | nucleus | 29.24 | 23.47 |
| GSMUA_Achr10P... | Banana | nucleus | 28.07 | 23.41 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 28.07 | 23.3 |
| Solyc02g032800.1.1 | Tomato | nucleus | 29.24 | 23.26 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 28.07 | 23.19 |
| GSMUA_Achr1P04050_001 | Banana | mitochondrion | 26.32 | 22.61 |
| CDY19509 | Canola | cytosol | 25.15 | 21.72 |
| CDY12918 | Canola | cytosol | 25.15 | 21.72 |
| Bra027071.1-P | Field mustard | cytosol | 25.15 | 21.72 |
| AT1G61930.1 | Thale cress | cytosol | 25.73 | 21.67 |
| KRH51082 | Soybean | nucleus | 29.24 | 21.64 |
| CDY49797 | Canola | mitochondrion | 25.73 | 21.46 |
| AT1G11700.1 | Thale cress | nucleus | 25.15 | 21.39 |
| CDY34631 | Canola | nucleus | 25.15 | 21.39 |
| CDX97979 | Canola | mitochondrion | 25.15 | 21.08 |
| Bra019837.1-P | Field mustard | mitochondrion | 25.15 | 20.98 |
| HORVU2Hr1G046550.2 | Barley | plastid | 25.15 | 20.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P00350_001 | EnsemblPlants:GSMUA_Achr6T00350_001 | EnsemblPlantsGene:GSMUA_Achr6G00350_001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF41 |
| PFAM:PF04520 | SEG:seg | UniParc:UPI000295A580 | UniProt:M0T2Y3 | MapMan:35.2 | : |
Description
DUF584 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G00350_001]
Coordinates
chr6:-:258138..258653
Molecular Weight (calculated)
18304.8 Da
IEP (calculated)
4.679
GRAVY (calculated)
-0.750
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKGFAPETS HSGSGSGGAD LDDLSEADVW SACHGDNGEG RNQDRRTSGD SSSRSVDQDA GGLSLVLRDT HVVTATAQTL PSEPERERVA TSAPVAVPAS
101: SLSSSKREED EPAGEWLPPH VYLERLHANA ASPSVLEGRG RTLKGRDLTM LRDSVWRRTG FLDYIDADEN K
101: SLSSSKREED EPAGEWLPPH VYLERLHANA ASPSVLEGRG RTLKGRDLTM LRDSVWRRTG FLDYIDADEN K
001: MEKSYMKHEL WGDGDFQEDD VWDVLDGYQS PFMISSNHTT KPSFSTQTLL PSEPRMIPER QRTEGMAPMR QQSVPVNVPD WSMVQRKKTK KVVDDENVSP
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
Arabidopsis Description
At4g26950 [Source:UniProtKB/TrEMBL;Acc:Q9SZ34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.