Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 26.13 | 46.85 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.08 | 46.38 |
| PGSC0003DMT400090902 | Potato | cytosol, plastid | 43.72 | 42.03 |
| Solyc03g082610.1.1 | Tomato | plastid | 43.22 | 41.55 |
| VIT_16s0098g01240.t01 | Wine grape | nucleus | 41.21 | 39.81 |
| GSMUA_Achr6P06990_001 | Banana | mitochondrion, nucleus | 33.67 | 39.65 |
| GSMUA_Achr11P... | Banana | mitochondrion | 25.13 | 34.97 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 14.57 | 33.72 |
| GSMUA_Achr10P... | Banana | nucleus | 31.66 | 30.73 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 20.1 | 29.63 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 23.62 | 28.66 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 23.12 | 28.4 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 22.61 | 26.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.12 | 25.27 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 23.12 | 25.14 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P04050_001 | EnsemblPlants:GSMUA_Achr1T04050_001 | EnsemblPlantsGene:GSMUA_Achr1G04050_001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF18 |
| PFAM:PF04520 | SEG:seg | UniParc:UPI0002955B03 | UniProt:M0RWW3 | MapMan:35.2 | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_98.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G04050_001]
Coordinates
chr1:-:3360112..3360939
Molecular Weight (calculated)
21705.8 Da
IEP (calculated)
8.549
GRAVY (calculated)
-0.347
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPLLLRTI LTSRCAGTPP YSPEARAVGG DERGRRRMED AASASVAQPS SATSFLRLLG LLKLPDADPD PDPFPTRHLE LDESDVVWSS PSEELSSSPS
101: PSVPGSSFSP FGRFRRRPAP ERFGLSAALV EDRLEALVAG RVAHHQSAPE EEMVPPHVIV ARSHVMTFSV FEGVGRTLKG RDLRRVRNAV LQKTGFLDV
101: PSVPGSSFSP FGRFRRRPAP ERFGLSAALV EDRLEALVAG RVAHHQSAPE EEMVPPHVIV ARSHVMTFSV FEGVGRTLKG RDLRRVRNAV LQKTGFLDV
001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
Arabidopsis Description
AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.