Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g082610.1.1 | Tomato | plastid | 97.1 | 97.1 |
| VIT_16s0098g01240.t01 | Wine grape | nucleus | 44.93 | 45.15 |
| GSMUA_Achr1P04050_001 | Banana | mitochondrion | 42.03 | 43.72 |
| PGSC0003DMT400020798 | Potato | plastid | 28.99 | 35.29 |
| PGSC0003DMT400045373 | Potato | cytosol | 23.67 | 33.33 |
| PGSC0003DMT400062500 | Potato | nucleus | 27.54 | 33.33 |
| PGSC0003DMT400015061 | Potato | cytosol, mitochondrion, nucleus, plastid | 32.85 | 30.63 |
| PGSC0003DMT400055482 | Potato | cytosol | 23.67 | 30.62 |
| PGSC0003DMT400072600 | Potato | nucleus | 35.27 | 30.29 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 28.99 | 30.15 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 29.47 | 29.47 |
| PGSC0003DMT400057474 | Potato | nucleus | 27.54 | 29.38 |
| PGSC0003DMT400023089 | Potato | cytosol | 33.82 | 29.17 |
| PGSC0003DMT400042495 | Potato | nucleus | 19.81 | 26.8 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400090902 | EnsemblPlantsGene:PGSC0003DMG400040473 | EntrezGene:102587607 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF18 |
| PFAM:PF04520 | PGSC:PGSC0003DMG400040473 | RefSeq:XP_006350496.1 | SEG:seg | UniParc:UPI000294B2DF | UniProt:M1DLG1 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400040473]
Coordinates
chr3:+:47863792..47864415
Molecular Weight (calculated)
22839.7 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.602
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAPITNTSS SSSSIRFMGL LKQPDSNPNN NILDEFDESD VFWSESPDST VVNSFSPPTP TRHLPQRPPT LYKPSNSGLS AALTDDHHPL VRRKSTLNPS
101: VSATSAAKMI PPVFRSENSN PNSYPKFHQS APVNVPVWQK KDGPVGGLDR FDEVEDEVEG EEMVPPHVMV AQSHVTFSVF EGVGRTLKGR DLRRVRNAVF
201: QKTGFID
101: VSATSAAKMI PPVFRSENSN PNSYPKFHQS APVNVPVWQK KDGPVGGLDR FDEVEDEVEG EEMVPPHVMV AQSHVTFSVF EGVGRTLKGR DLRRVRNAVF
201: QKTGFID
001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD
Arabidopsis Description
AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.