Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 97.04 | 97.04 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 96.45 | 96.45 |
| Zm00001d021627_P001 | Maize | mitochondrion | 65.09 | 58.51 |
| Zm00001d006489_P001 | Maize | mitochondrion | 65.09 | 57.29 |
| EER99449 | Sorghum | mitochondrion | 65.09 | 56.7 |
| Os07t0516300-01 | Rice | mitochondrion | 63.91 | 55.1 |
| HORVU2Hr1G046550.2 | Barley | plastid | 59.17 | 48.31 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 21.3 | 41.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.09 | 33.52 |
| KRH20860 | Soybean | mitochondrion | 38.46 | 33.33 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 36.09 | 33.33 |
| KRH11426 | Soybean | mitochondrion | 37.87 | 33.16 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 37.28 | 32.64 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 34.91 | 32.42 |
| CDX79110 | Canola | nucleus | 33.14 | 32.37 |
| Bra013574.1-P | Field mustard | cytosol | 33.14 | 32.37 |
| CDX82885 | Canola | nucleus | 32.54 | 31.79 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 31.95 | 31.58 |
| TraesCS2A01G391200.1 | Wheat | nucleus | 37.28 | 31.34 |
| AT4G21930.1 | Thale cress | cytosol | 33.73 | 31.15 |
| TraesCS5A01G127300.1 | Wheat | cytosol | 28.4 | 30.57 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 35.5 | 30.15 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 37.87 | 30.05 |
| CDY49797 | Canola | mitochondrion | 36.09 | 29.76 |
| Bra019837.1-P | Field mustard | mitochondrion | 36.09 | 29.76 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 36.09 | 29.61 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 36.09 | 29.47 |
| CDX97979 | Canola | mitochondrion | 35.5 | 29.41 |
| CDY34631 | Canola | nucleus | 34.91 | 29.35 |
| AT1G11700.1 | Thale cress | nucleus | 34.91 | 29.35 |
| KRH02073 | Soybean | nucleus | 36.69 | 29.11 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 30.77 | 28.73 |
| AT1G61930.1 | Thale cress | cytosol | 34.32 | 28.57 |
| Solyc02g032800.1.1 | Tomato | nucleus | 36.09 | 28.37 |
| Bra027071.1-P | Field mustard | cytosol | 33.14 | 28.28 |
| CDY19509 | Canola | cytosol | 33.14 | 28.28 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 29.59 | 28.09 |
| CDY12918 | Canola | cytosol | 32.54 | 27.78 |
| KRH51082 | Soybean | nucleus | 36.69 | 26.84 |
| TraesCS5A01G539400.1 | Wheat | cytosol | 32.54 | 26.7 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 25.44 | 24.43 |
| TraesCS2A01G295700.1 | Wheat | nucleus | 27.22 | 19.49 |
| TraesCS3A01G375300.1 | Wheat | mitochondrion, plastid | 27.22 | 18.7 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G222500.1 | EnsemblPlantsGene:TraesCS2A01G222500 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:214237251..214237965
Molecular Weight (calculated)
18356.0 Da
IEP (calculated)
5.672
GRAVY (calculated)
-0.780
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKARKPTAF SAAERFLGFH HRPGSATVAP SPYDDLPDLA ESDVWYSPSS DAPTTTADQD GVQRTDRAPR GEPPRRVGGL SHAFADGRQV ASSAPVEVPA
101: WPSRFADLEP EPEPDEQQQE DADGWVPPHV YLARRQARAS VVEGVGRTLK GRDASRVRDA VWSRTGFPG
101: WPSRFADLEP EPEPDEQQQE DADGWVPPHV YLARRQARAS VVEGVGRTLK GRDASRVRDA VWSRTGFPG
001: MAKGRKPTTM NRSDRYLGSY TYGDSHGNSV TDELELGEED IWSPAVIHDD TTENEESYGT WNLRATLGKN GRVGGLSLAF EGSLVAPPSS SPMIVQKIHG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
Arabidopsis Description
At1g61930 [Source:UniProtKB/TrEMBL;Acc:O80698]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.