Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019837.1-P | Field mustard | mitochondrion | 98.05 | 98.05 |
| CDX97979 | Canola | mitochondrion | 97.07 | 97.55 |
| AT1G11700.1 | Thale cress | nucleus | 84.39 | 86.07 |
| CDY34631 | Canola | nucleus | 79.51 | 81.09 |
| CDY12918 | Canola | cytosol | 65.37 | 67.68 |
| CDY19509 | Canola | cytosol | 63.9 | 66.16 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 49.27 | 49.03 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 47.32 | 48.74 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 48.78 | 48.31 |
| Solyc02g032800.1.1 | Tomato | nucleus | 49.27 | 46.98 |
| CDX79110 | Canola | nucleus | 37.07 | 43.93 |
| CDX82885 | Canola | nucleus | 36.59 | 43.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.59 | 41.21 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 17.07 | 40.7 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 35.61 | 39.89 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 34.15 | 39.33 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 33.17 | 38.64 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 34.15 | 38.46 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 33.66 | 38.33 |
| EER97815 | Sorghum | mitochondrion | 29.76 | 36.31 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 29.76 | 36.09 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 29.27 | 35.5 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 29.27 | 35.5 |
| CDY65979 | Canola | nucleus | 23.9 | 30.82 |
| CDX79115 | Canola | nucleus | 22.44 | 30.07 |
| CDX94568 | Canola | nucleus | 21.95 | 30.0 |
| CDY29096 | Canola | nucleus | 21.95 | 30.0 |
| CDX94069 | Canola | nucleus | 22.93 | 29.94 |
| CDX98721 | Canola | nucleus | 22.93 | 29.94 |
| Os07t0516300-01 | Rice | mitochondrion | 28.29 | 29.59 |
| Zm00001d006489_P001 | Maize | mitochondrion | 27.32 | 29.17 |
| CDX82889 | Canola | nucleus | 21.46 | 28.95 |
| EER99449 | Sorghum | mitochondrion | 27.32 | 28.87 |
| Zm00001d021627_P001 | Maize | mitochondrion | 26.34 | 28.72 |
| CDY62461 | Canola | nucleus | 21.95 | 28.48 |
| CDX92790 | Canola | nucleus | 20.49 | 28.19 |
| CDY16655 | Canola | nucleus | 22.93 | 28.14 |
| CDY46674 | Canola | nucleus | 20.49 | 28.0 |
| CDX77180 | Canola | nucleus | 22.44 | 27.88 |
| CDX70321 | Canola | nucleus | 23.41 | 27.27 |
| CDY10396 | Canola | nucleus | 23.41 | 27.27 |
| CDY11244 | Canola | cytosol | 22.93 | 26.4 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 21.46 | 25.73 |
| CDX80857 | Canola | cytosol | 22.44 | 25.7 |
| CDX97628 | Canola | nucleus | 25.85 | 24.54 |
| CDY68595 | Canola | nucleus | 25.37 | 24.07 |
| CDY32323 | Canola | nucleus | 23.9 | 23.67 |
| CDY20098 | Canola | nucleus | 23.41 | 23.3 |
| HORVU2Hr1G046550.2 | Barley | plastid | 22.93 | 22.71 |
| CDX82452 | Canola | nucleus | 24.88 | 22.67 |
| CDX75803 | Canola | nucleus | 24.88 | 21.61 |
Protein Annotations
| EnsemblPlants:CDY49797 | EnsemblPlantsGene:GSBRNA2T00093820001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 |
| ProteinID:CDY49797 | ProteinID:CDY49797.1 | SEG:seg | UniParc:UPI0004EE3750 | UniProt:A0A078IIP1 | MapMan:35.2 |
Description
BnaCnng18100DBnaCnng18100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIP1]
Coordinates
chrLK032859:+:69425..70310
Molecular Weight (calculated)
22070.3 Da
IEP (calculated)
5.144
GRAVY (calculated)
-0.711
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVRKLTIS QSERYLGSSY SFGGSNGNSV TDESELTEED VWSHAVDHSP EDTPESFGAW SSHDAVMRNG RVCGGLSLAF EDMSSSPTIV HQIRGVGEVG
101: GGEVGGGGGG GQGQRQLASS APVNVPDWSK IYRVNSVESI HESEEEEDEE SGMMPPHEYL AKSQKRRSRK SGGGASVFEG VGKTLKGREL RRVRDAIWSQ
201: TGFYG
101: GGEVGGGGGG GQGQRQLASS APVNVPDWSK IYRVNSVESI HESEEEEDEE SGMMPPHEYL AKSQKRRSRK SGGGASVFEG VGKTLKGREL RRVRDAIWSQ
201: TGFYG
001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G
Arabidopsis Description
At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.