Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013574.1-P | Field mustard | cytosol | 95.95 | 95.95 |
| CDX82885 | Canola | nucleus | 92.49 | 92.49 |
| AT4G21930.1 | Thale cress | cytosol | 66.47 | 62.84 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 48.55 | 43.52 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 21.39 | 43.02 |
| KRH20860 | Soybean | mitochondrion | 46.82 | 41.54 |
| KRH11426 | Soybean | mitochondrion | 46.24 | 41.45 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 49.71 | 40.38 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 45.66 | 39.7 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 46.82 | 39.13 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 46.24 | 38.84 |
| CDY34631 | Canola | nucleus | 45.09 | 38.81 |
| TraesCS2D01G266500.1 | Wheat | mitochondrion, nucleus | 39.31 | 38.2 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 39.31 | 37.78 |
| CDX97979 | Canola | mitochondrion | 44.51 | 37.75 |
| KRH51082 | Soybean | nucleus | 50.29 | 37.66 |
| KRH02073 | Soybean | nucleus | 46.24 | 37.56 |
| TraesCS2A01G256200.1 | Wheat | mitochondrion, nucleus | 39.31 | 37.36 |
| Solyc02g032800.1.1 | Tomato | nucleus | 46.24 | 37.21 |
| CDY49797 | Canola | mitochondrion | 43.93 | 37.07 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 37.57 | 36.93 |
| CDY12918 | Canola | cytosol | 42.2 | 36.87 |
| CDY19509 | Canola | cytosol | 41.62 | 36.36 |
| EER97815 | Sorghum | mitochondrion | 35.26 | 36.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.15 | 36.26 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 38.15 | 36.07 |
| TraesCS2B01G247900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 32.37 | 33.14 |
| TraesCS2A01G222500.1 | Wheat | cytosol | 32.37 | 33.14 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.79 | 32.54 |
| CDY29096 | Canola | nucleus | 27.17 | 31.33 |
| CDX94568 | Canola | nucleus | 27.17 | 31.33 |
| Zm00001d021627_P001 | Maize | mitochondrion | 32.95 | 30.32 |
| Os07t0516300-01 | Rice | mitochondrion | 33.53 | 29.59 |
| CDY65979 | Canola | nucleus | 27.17 | 29.56 |
| CDY16655 | Canola | nucleus | 28.32 | 29.34 |
| Zm00001d006489_P001 | Maize | mitochondrion | 32.37 | 29.17 |
| CDX79115 | Canola | nucleus | 25.43 | 28.76 |
| CDX94069 | Canola | nucleus | 26.01 | 28.66 |
| CDX98721 | Canola | nucleus | 26.01 | 28.66 |
| EER99449 | Sorghum | mitochondrion | 31.79 | 28.35 |
| CDX82889 | Canola | nucleus | 24.28 | 27.63 |
| CDY46674 | Canola | nucleus | 23.7 | 27.33 |
| CDY62461 | Canola | nucleus | 24.86 | 27.22 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 26.59 | 26.9 |
| CDX92790 | Canola | nucleus | 23.12 | 26.85 |
| CDX77180 | Canola | nucleus | 24.86 | 26.06 |
| CDY20098 | Canola | nucleus | 29.48 | 24.76 |
| CDY32323 | Canola | nucleus | 29.48 | 24.64 |
| CDX70321 | Canola | nucleus | 23.12 | 22.73 |
| CDY10396 | Canola | nucleus | 23.12 | 22.73 |
| CDX97628 | Canola | nucleus | 28.32 | 22.69 |
| CDY11244 | Canola | cytosol | 23.12 | 22.47 |
| CDY68595 | Canola | nucleus | 27.75 | 22.22 |
| CDX80857 | Canola | cytosol | 22.54 | 21.79 |
| HORVU2Hr1G046550.2 | Barley | plastid | 25.43 | 21.26 |
| CDX82452 | Canola | nucleus | 26.01 | 20.0 |
| CDX75803 | Canola | nucleus | 25.43 | 18.64 |
Protein Annotations
| EnsemblPlants:CDX79110 | EnsemblPlantsGene:GSBRNA2T00131654001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 |
| ProteinID:CDX79110 | ProteinID:CDX79110.1 | SEG:seg | UniParc:UPI0004EF06E7 | MapMan:35.2 | : |
Description
BnaA01g11770D
Coordinates
chrLK031816:+:1835722..1836243
Molecular Weight (calculated)
19402.5 Da
IEP (calculated)
6.979
GRAVY (calculated)
-1.056
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKGRRLTIS RSERFLWDHH KSSDRHMDGE AAVEMELMEE DVWSAMEAHE QPNAWTIRSP KTTGGERRHN GGGMGGLADN NDGRRKKHVA SSAPVKVPEW
101: SKISKEEESI ESLHNDNTSD VGDGEMVPPH EYVARSRNGD GSSSMFLGVG RTLKGRDMRR VRDAVWSQTG FDG
101: SKISKEEESI ESLHNDNTSD VGDGEMVPPH EYVARSRNGD GSSSMFLGVG RTLKGRDMRR VRDAVWSQTG FDG
001: MGKGRSLPIS RSERFLGSHQ QSDDHHVDGE TTFELELMEE DVWSVVEPDE PKELGAWNAR SLEASGSEWR RKGGRVSDLT VPSDGQRKRH VATSAPVKVP
101: DWSKILKVES VKSMHNNNND NDNADVADCD WESAMVPPHE YVAARSRNGD GGSSVFLGVG RTLKGRDMRR VRDAVWSQTG FYG
101: DWSKILKVES VKSMHNNNND NDNADVADCD WESAMVPPHE YVAARSRNGD GGSSVFLGVG RTLKGRDMRR VRDAVWSQTG FYG
Arabidopsis Description
Uncharacterized protein At4g21930 [Source:UniProtKB/TrEMBL;Acc:Q8L864]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.