Factsheet for Bra013574.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79110	Canola	nucleus	95.95	95.95
AT4G21930.1	Thale cress	cytosol	66.47	62.84
GSMUA_Achr7P00240_001	Banana	extracellular	21.97	44.19
VIT_10s0116g01810.t01	Wine grape	mitochondrion, nucleus	47.98	43.01
KRH11426	Soybean	mitochondrion	45.66	40.93
KRH20860	Soybean	mitochondrion	45.66	40.51
VIT_10s0116g01820.t01	Wine grape	mitochondrion, nucleus	49.13	39.91
PGSC0003DMT400032972	Potato	mitochondrion	45.66	39.7
PGSC0003DMT400042431	Potato	mitochondrion, nucleus	46.24	38.65
Solyc02g080510.1.1	Tomato	mitochondrion	45.66	38.35
TraesCS2D01G266500.1	Wheat	mitochondrion, nucleus	39.31	38.2
TraesCS2B01G286300.1	Wheat	mitochondrion, nucleus	39.31	37.78
Bra019837.1-P	Field mustard	mitochondrion	44.51	37.56
TraesCS2A01G256200.1	Wheat	mitochondrion, nucleus	39.31	37.36
KRH51082	Soybean	nucleus	49.71	37.23
Solyc02g032800.1.1	Tomato	nucleus	46.24	37.21
KRH02073	Soybean	nucleus	45.66	37.09
HORVU2Hr1G064730.1	Barley	cytosol	37.57	36.93
Bra027071.1-P	Field mustard	cytosol	42.2	36.87
GSMUA_AchrUn_...	Banana	nucleus	37.57	35.71
GSMUA_Achr4P33500_001	Banana	nucleus	37.57	35.52
EER97815	Sorghum	mitochondrion	34.1	35.12
TraesCS2B01G247900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	32.37	33.14
TraesCS2A01G222500.1	Wheat	cytosol	32.37	33.14
TraesCS2D01G228500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	31.79	32.54
Bra029510.1-P	Field mustard	nucleus	26.01	30.2
Bra002459.1-P	Field mustard	nucleus	27.75	30.0
Zm00001d021627_P001	Maize	mitochondrion	32.37	29.79
Os07t0516300-01	Rice	mitochondrion	33.53	29.59
Bra020237.1-P	Field mustard	nucleus	27.75	28.92
Bra013577.1-P	Field mustard	nucleus	25.43	28.76
Bra019408.1-P	Field mustard	nucleus	26.01	28.66
Zm00001d006489_P001	Maize	mitochondrion	31.79	28.65
EER99449	Sorghum	mitochondrion	31.21	27.84
Bra019080.1-P	Field mustard	nucleus	23.7	27.15
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	26.01	26.32
Bra027283.1-P	Field mustard	nucleus	28.32	22.79
Bra021587.1-P	Field mustard	nucleus	28.9	22.73
Bra009543.1-P	Field mustard	nucleus	23.12	22.73
Bra005738.1-P	Field mustard	cytosol	23.12	22.47
HORVU2Hr1G046550.2	Barley	plastid	25.43	21.26
Bra001580.1-P	Field mustard	nucleus	26.01	20.0
Bra035703.1-P	Field mustard	cytosol	24.86	17.48

Protein Annotations

EnsemblPlants:Bra013574.1	EnsemblPlants:Bra013574.1-P	EnsemblPlantsGene:Bra013574	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF11
PFAM:PF04520	SEG:seg	UniParc:UPI000254553B	UniProt:M4DAR4	MapMan:35.2	:

Description

AT4G21930 (E=1e-047) | unknown protein

Coordinates

chrA01:+:6414265..6414786

Molecular Weight (calculated)

19330.3 Da

IEP (calculated)

6.979

GRAVY (calculated)

-1.069

Length

173 amino acids

Sequence
(BLAST)

001: MRKGRRLTIS RSERFLWDHH KSSDRHMDGK AAVEMELMEE DVWSVMEAHE QPNAWTIRSP KTTGGERRHN GGGTGGLADN NDGRRKKHVA SSAPVKVPDW
101: SEISKEEESI ESSHNDNASD VGDGEMVPPH EYVARSRNGD GSSSMFLGVG RTLKGRDMRR VRDAVWSQTG FDG

Best Arabidopsis Sequence Match ( AT4G21930.1 )
(BLAST)

001: MGKGRSLPIS RSERFLGSHQ QSDDHHVDGE TTFELELMEE DVWSVVEPDE PKELGAWNAR SLEASGSEWR RKGGRVSDLT VPSDGQRKRH VATSAPVKVP
101: DWSKILKVES VKSMHNNNND NDNADVADCD WESAMVPPHE YVAARSRNGD GGSSVFLGVG RTLKGRDMRR VRDAVWSQTG FYG

Arabidopsis Description

Uncharacterized protein At4g21930 [Source:UniProtKB/TrEMBL;Acc:Q8L864]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.