CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021627_P001	Maize	mitochondrion	86.08	88.83
Zm00001d006489_P001	Maize	mitochondrion	81.96	82.81
TraesCS2B01G247900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	56.7	65.09
TraesCS2A01G222500.1	Wheat	cytosol	56.7	65.09
TraesCS2D01G228500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	56.19	64.5
Os07t0516300-01	Rice	mitochondrion	56.19	55.61
GSMUA_Achr7P00240_001	Banana	extracellular	20.1	45.35
GSMUA_AchrUn_...	Banana	nucleus	35.05	37.36
GSMUA_Achr4P33500_001	Banana	nucleus	35.05	37.16
HORVU2Hr1G046550.2	Barley	plastid	38.66	36.23
KRH20860	Soybean	mitochondrion	36.08	35.9
GSMUA_Achr6P00350_001	Banana	cytosol, nucleus, plastid	30.93	35.09
KRH11426	Soybean	mitochondrion	34.54	34.72
VIT_10s0116g01810.t01	Wine grape	mitochondrion, nucleus	34.54	34.72
EER97815	Sorghum	mitochondrion	29.9	34.52
Solyc02g080510.1.1	Tomato	mitochondrion	34.02	32.04
VIT_10s0116g01820.t01	Wine grape	mitochondrion, nucleus	35.05	31.92
CDX79110	Canola	nucleus	28.35	31.79
Bra013574.1-P	Field mustard	cytosol	27.84	31.21
PGSC0003DMT400032972	Potato	mitochondrion	31.96	31.16
EER91475	Sorghum	mitochondrion	30.41	31.05
EES15690	Sorghum	cytosol, mitochondrion, plastid	27.32	30.64
AT4G21930.1	Thale cress	cytosol	28.87	30.6
PGSC0003DMT400042431	Potato	mitochondrion, nucleus	32.47	30.43
CDX82885	Canola	nucleus	26.8	30.06
KRH02073	Soybean	nucleus	32.47	29.58
Solyc02g032800.1.1	Tomato	nucleus	32.47	29.3
EES11200	Sorghum	mitochondrion	31.96	28.7
KRH51082	Soybean	nucleus	34.02	28.57
AT1G11700.1	Thale cress	nucleus	28.35	27.36
Bra019837.1-P	Field mustard	mitochondrion	28.87	27.32
CDY49797	Canola	mitochondrion	28.87	27.32
Bra027071.1-P	Field mustard	cytosol	27.84	27.27
CDY19509	Canola	cytosol	27.84	27.27
CDX97979	Canola	mitochondrion	28.35	26.96
CDY12918	Canola	cytosol	27.32	26.77
AT1G61930.1	Thale cress	cytosol	27.84	26.6
CDY34631	Canola	nucleus	27.32	26.37
KXG26730	Sorghum	mitochondrion	25.26	25.65
OQU81531	Sorghum	nucleus	31.44	24.21
EER94255	Sorghum	mitochondrion, nucleus	29.9	24.07
EES01798	Sorghum	mitochondrion, nucleus	25.26	23.67

Protein Annotations

EnsemblPlants:EER99449	EnsemblPlantsGene:SORBI_3002G318000	EntrezGene:8080117	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF11
PFAM:PF04520	ProteinID:EER99449	ProteinID:EER99449.1	RefSeq:XP_002462928.1	SEG:seg	UniParc:UPI0001A840C1
UniProt:C5XA06	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:69041681..69044008

Molecular Weight (calculated)

19978.2 Da

IEP (calculated)

5.065

GRAVY (calculated)

-0.472

Length

194 amino acids

Sequence
(BLAST)

001: MAKARRPPFA AAERFLGFPR GGPSPGAVAP APAADFDDLP DLAEADVWYT AAGGGGDPGS PCPAASRQVE VEGRSAGGQR GAPRRGVQGG LSQAFGDGPG
101: GRQVAASAPV EVPAWPARFA VPDAEPALLF EMEMGDDDDE GDGKRGAGGW VPPHVYLARR QARASVVEGA GRTLKGRDMS RVRDAVWSRT GFDG

Best Arabidopsis Sequence Match ( AT1G11700.1 )
(BLAST)

001: MARGRKLTMS QSERYLGSSY SYGDSNGNSA TDESELTEED IWSHAVDHSP EMLESHGAWN TRDAVVRNGR VGGGLSLAFE DASSSPRIVH QIRGGGEGGG
101: GGGGGGRVER QLASSAPVNV PDWSKIYRVN SVESIHESDE EEEEDSGMMM PPHEYLAKSQ QRRSRKSGGG GSVFEGVGRT LKGRELRRVR DAIWSQTGFY
201: G

Arabidopsis Description

At1g11700 [Source:UniProtKB/TrEMBL;Acc:Q9SAA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.