Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G222500.1 | Wheat | cytosol | 97.04 | 97.04 |
| TraesCS2D01G228500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 95.86 | 95.86 |
| Zm00001d021627_P001 | Maize | mitochondrion | 65.68 | 59.04 |
| Zm00001d006489_P001 | Maize | mitochondrion | 66.27 | 58.33 |
| EER99449 | Sorghum | mitochondrion | 65.09 | 56.7 |
| Os07t0516300-01 | Rice | mitochondrion | 63.91 | 55.1 |
| HORVU2Hr1G046550.2 | Barley | plastid | 59.76 | 48.79 |
| GSMUA_Achr7P00240_001 | Banana | extracellular | 21.3 | 41.86 |
| KRH20860 | Soybean | mitochondrion | 39.65 | 34.36 |
| KRH11426 | Soybean | mitochondrion | 39.05 | 34.2 |
| VIT_10s0116g01810.t01 | Wine grape | mitochondrion, nucleus | 38.46 | 33.68 |
| TraesCS2B01G286300.1 | Wheat | mitochondrion, nucleus | 35.5 | 33.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.5 | 32.97 |
| GSMUA_Achr4P33500_001 | Banana | nucleus | 35.5 | 32.79 |
| TraesCS5B01G126400.1 | Wheat | cytosol | 30.18 | 32.48 |
| Bra013574.1-P | Field mustard | cytosol | 33.14 | 32.37 |
| CDX79110 | Canola | nucleus | 33.14 | 32.37 |
| CDX82885 | Canola | nucleus | 32.54 | 31.79 |
| GSMUA_Achr6P00350_001 | Banana | cytosol, nucleus, plastid | 31.95 | 31.58 |
| PGSC0003DMT400032972 | Potato | mitochondrion | 36.69 | 31.16 |
| AT4G21930.1 | Thale cress | cytosol | 33.73 | 31.15 |
| VIT_10s0116g01820.t01 | Wine grape | mitochondrion, nucleus | 39.05 | 30.99 |
| Solyc02g080510.1.1 | Tomato | mitochondrion | 37.28 | 30.58 |
| PGSC0003DMT400042431 | Potato | mitochondrion, nucleus | 37.28 | 30.43 |
| AT1G11700.1 | Thale cress | nucleus | 36.09 | 30.35 |
| KRH02073 | Soybean | nucleus | 37.87 | 30.05 |
| TraesCS2B01G407800.1 | Wheat | nucleus | 35.5 | 29.85 |
| CDY34631 | Canola | nucleus | 34.91 | 29.35 |
| Solyc02g032800.1.1 | Tomato | nucleus | 37.28 | 29.3 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 31.36 | 29.28 |
| Bra019837.1-P | Field mustard | mitochondrion | 35.5 | 29.27 |
| CDY49797 | Canola | mitochondrion | 35.5 | 29.27 |
| AT1G61930.1 | Thale cress | cytosol | 34.91 | 29.06 |
| CDX97979 | Canola | mitochondrion | 34.91 | 28.92 |
| Bra027071.1-P | Field mustard | cytosol | 33.73 | 28.79 |
| CDY19509 | Canola | cytosol | 33.73 | 28.79 |
| CDY12918 | Canola | cytosol | 33.14 | 28.28 |
| KRH51082 | Soybean | nucleus | 37.87 | 27.71 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 28.99 | 27.53 |
| TraesCS4B01G397900.1 | Wheat | cytosol | 31.95 | 25.47 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 26.04 | 25.43 |
| TraesCS3B01G407500.1 | Wheat | nucleus | 27.22 | 21.4 |
| TraesCS2B01G312200.1 | Wheat | nucleus | 29.59 | 21.19 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G247900.1 | EnsemblPlantsGene:TraesCS2B01G247900 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF11 | PFAM:PF04520 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:254621789..254622566
Molecular Weight (calculated)
18422.1 Da
IEP (calculated)
5.735
GRAVY (calculated)
-0.766
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKARKQTAF SAAERFLGFH HRPGSATVAP SPYDDLPDLA ESDVWYSPSS DAPTTTADQD GIQRTDRAPR GEPPRRVGGL SRAFADGRQV ASSAPVEVPA
101: WPSRFADLEL EPEPDEQQQD DADGWVPPHV YLARRQARAS VVEGVGRTLK GRDASRVRDA VWSRTGFPG
101: WPSRFADLEL EPEPDEQQQD DADGWVPPHV YLARRQARAS VVEGVGRTLK GRDASRVRDA VWSRTGFPG
001: MAKGRKPTTM NRSDRYLGSY TYGDSHGNSV TDELELGEED IWSPAVIHDD TTENEESYGT WNLRATLGKN GRVGGLSLAF EGSLVAPPSS SPMIVQKIHG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
Arabidopsis Description
At1g61930 [Source:UniProtKB/TrEMBL;Acc:O80698]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.