Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46674 | Canola | nucleus | 97.35 | 98.0 |
| CDX92790 | Canola | nucleus | 94.7 | 95.97 |
| AT4G26950.1 | Thale cress | nucleus | 72.85 | 76.39 |
| KRH33098 | Soybean | cytosol | 32.45 | 37.69 |
| GSMUA_Achr2P13950_001 | Banana | nucleus | 33.11 | 37.04 |
| KRH14391 | Soybean | nucleus | 44.37 | 35.26 |
| Bra019408.1-P | Field mustard | nucleus | 35.76 | 34.39 |
| KRH73758 | Soybean | nucleus | 43.71 | 33.85 |
| Bra029510.1-P | Field mustard | nucleus | 32.45 | 32.89 |
| Bra013577.1-P | Field mustard | nucleus | 33.11 | 32.68 |
| KRH46190 | Soybean | cytosol | 44.37 | 31.6 |
| VIT_19s0090g00510.t01 | Wine grape | plastid | 43.71 | 28.45 |
| KRG98750 | Soybean | nucleus | 36.42 | 26.44 |
| Bra002459.1-P | Field mustard | nucleus | 26.49 | 25.0 |
| Bra013574.1-P | Field mustard | cytosol | 27.15 | 23.7 |
| Bra020237.1-P | Field mustard | nucleus | 25.17 | 22.89 |
| Bra027071.1-P | Field mustard | cytosol | 29.14 | 22.22 |
| Bra019837.1-P | Field mustard | mitochondrion | 28.48 | 20.98 |
| Bra027283.1-P | Field mustard | nucleus | 28.48 | 20.0 |
| Bra009543.1-P | Field mustard | nucleus | 23.18 | 19.89 |
| Bra005738.1-P | Field mustard | cytosol | 23.18 | 19.66 |
| Bra021587.1-P | Field mustard | nucleus | 27.15 | 18.64 |
| Bra001580.1-P | Field mustard | nucleus | 25.83 | 17.33 |
| Bra035703.1-P | Field mustard | cytosol | 24.5 | 15.04 |
Protein Annotations
| EnsemblPlants:Bra019080.1 | EnsemblPlants:Bra019080.1-P | EnsemblPlantsGene:Bra019080 | GO:GO:0005575 | GO:GO:0009506 | InterPro:Senescence_reg_S40 |
| PANTHER:PTHR33083 | PANTHER:PTHR33083:SF4 | PFAM:PF04520 | SEG:seg | UniParc:UPI0002541260 | UniProt:M4DRD7 |
| MapMan:35.2 | : | : | : | : | : |
Description
AT4G26950 (E=3e-049) | unknown protein
Coordinates
chrA03:-:26429944..26430399
Molecular Weight (calculated)
17537.7 Da
IEP (calculated)
9.375
GRAVY (calculated)
-1.039
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNIKRYDV WRSLKDGDYQ EEDVWDVLDG YHQPSLMISN HTSKPSLLAQ TFLSSEPRMI PERQRREGMA HMGQHSAPVN VPEWSMVHRK KTKKLEDDDD
101: DDENVSPEEY FLRRSRSSSS SSVMEGVGRK LKGRDLSKVR NAVLKKTGFL K
101: DDENVSPEEY FLRRSRSSSS SSVMEGVGRK LKGRDLSKVR NAVLKKTGFL K
001: MEKSYMKHEL WGDGDFQEDD VWDVLDGYQS PFMISSNHTT KPSFSTQTLL PSEPRMIPER QRTEGMAPMR QQSVPVNVPD WSMVQRKKTK KVVDDENVSP
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
101: EEYFLRRSRS SSSSSVMEGV GRKLKGRDLS KVRNAILKQT GFLE
Arabidopsis Description
At4g26950 [Source:UniProtKB/TrEMBL;Acc:Q9SZ34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.