CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25013	Soybean	mitochondrion	87.72	88.24
KRH22888	Soybean	cytosol, mitochondrion, nucleus	54.97	61.04
KRH26408	Soybean	cytosol	50.29	57.72
Solyc06g075170.1.1	Tomato	nucleus	47.37	49.69
PGSC0003DMT400020798	Potato	plastid	47.37	47.65
VIT_06s0004g02830.t01	Wine grape	cytosol	46.2	47.31
Solyc11g069450.1.1	Tomato	cytosol	47.37	46.82
PGSC0003DMT400062500	Potato	nucleus	46.78	46.78
GSMUA_Achr11P...	Banana	mitochondrion	37.43	44.76
KRG95986	Soybean	nucleus	38.01	42.76
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	39.77	41.46
GSMUA_Achr8P18920_001	Banana	cytosol, mitochondrion	38.6	40.74
KRH67690	Soybean	cytosol	37.43	38.55
KRH19865	Soybean	mitochondrion	39.77	37.78
Os04t0520700-01	Rice	mitochondrion	38.01	37.36
KRH32477	Soybean	cytosol	40.94	37.23
TraesCS2A01G380100.1	Wheat	mitochondrion	38.6	37.08
TraesCS2D01G376300.1	Wheat	mitochondrion	37.43	36.16
HORVU0Hr1G005210.2	Barley	cytosol, plastid	37.43	36.16
TraesCS2B01G397000.1	Wheat	mitochondrion	37.43	35.96
Os02t0629000-01	Rice	mitochondrion	34.5	34.71
TraesCS6D01G212800.1	Wheat	cytosol	35.09	34.68
TraesCS6B01G258900.1	Wheat	nucleus	34.5	34.1
HORVU1Hr1G041890.1	Barley	mitochondrion	35.67	34.08
Zm00001d025872_P001	Maize	mitochondrion	35.67	33.89
HORVU0Hr1G016350.1	Barley	cytosol, mitochondrion, nucleus, plastid	35.09	33.71
TraesCS1D01G155400.1	Wheat	mitochondrion	35.67	33.7
TraesCS1B01G174100.1	Wheat	mitochondrion	35.67	33.7
TraesCS1A01G157900.1	Wheat	mitochondrion	35.67	33.7
Zm00001d003009_P001	Maize	mitochondrion, nucleus	36.26	33.7
TraesCS6A01G222200.1	Wheat	cytosol	34.5	33.52
KRH33098	Soybean	cytosol	24.56	32.31
KXG26730	Sorghum	mitochondrion	35.67	31.94
KRH20851	Soybean	nucleus	30.41	31.9
Zm00001d014007_P001	Maize	cytosol, plastid	33.33	31.84
Zm00001d017287_P001	Maize	cytosol	31.58	31.76
EER91475	Sorghum	mitochondrion	35.09	31.58
KRH73758	Soybean	nucleus	35.09	30.77
KRH14391	Soybean	nucleus	33.92	30.53
KRH51093	Soybean	nucleus	32.16	29.1
KRH11426	Soybean	mitochondrion	32.16	28.5
KRH20860	Soybean	mitochondrion	32.16	28.21
KRH02067	Soybean	nucleus	30.41	28.11
KRH46190	Soybean	cytosol	33.92	27.36
KRH02073	Soybean	nucleus	33.33	26.76
KRH67951	Soybean	cytosol, plastid	32.75	25.69
KRH51082	Soybean	nucleus	32.75	24.24
KRH22667	Soybean	nucleus	34.5	23.98
KRG98750	Soybean	nucleus	27.49	22.6
KRH26654	Soybean	cytosol	31.58	22.31
KRH30402	Soybean	nucleus	29.82	21.89
KRG96207	Soybean	plastid	31.58	20.3
KRH25262	Soybean	nucleus	26.32	18.59
Os10t0481000-00	Rice	mitochondrion	23.39	13.38

Protein Annotations

EMBL:ACUP02006835	EnsemblPlants:KRH29916	EnsemblPlantsGene:GLYMA_11G146200	EntrezGene:100782946	InterPro:Senescence_reg_S40	PANTHER:PTHR33083
PANTHER:PTHR33083:SF9	PFAM:PF04520	ProteinID:KRH29916	ProteinID:KRH29916.1	SEG:seg	UniParc:UPI0001B637F5
UniProt:A0A0R0HH96	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:11271962..11273386

Molecular Weight (calculated)

19201.8 Da

IEP (calculated)

5.634

GRAVY (calculated)

-0.934

Length

171 amino acids

Sequence
(BLAST)

001: MLTIMSSRKN HFSSRSHRFL PVASDIDDSA SLTMDSESAF EFDESELYNS VQANSFEFQR SLHSRGSNNS SAKKKPSSSS GAPASMPVNI PDWSKILGDE
101: YRRRNSFDDD DNDDNNEGYD DERSGRVPPH EFLARNRVAS FSVHEGVGRT LKGRDLSTLR NAIWAKTGFQ D

Best Arabidopsis Sequence Match ( AT3G45210.1 )
(BLAST)

001: MATATRKSYY QRPSHRFLPT DRTYNVTGDS EFEFDESDLY SNRSDSPEFR RKLITSNRKS SPATVTTTTV ASSLPMNVQN WSKILGKENR KSIENDDDGG
101: EGKLPPHEYL AKTRMASFSV HEGIGRTLKG RDMSRVRNAI LEKTGFLD

Arabidopsis Description

AT3g45210/T14D3_150 [Source:UniProtKB/TrEMBL;Acc:Q9M1T8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.