Factsheet for Solyc06g074260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015061	Potato	cytosol, mitochondrion, nucleus, plastid	54.66	95.05
VIT_06s0080g00750.t01	Wine grape	cytosol	7.51	58.0
Solyc10g083260.1.1	Tomato	nucleus	8.03	41.89
KRH30402	Soybean	nucleus	25.13	41.63
KRH26654	Soybean	cytosol	25.39	40.5
KRH25262	Soybean	nucleus	24.61	39.26
KRH22667	Soybean	nucleus	24.61	38.62
GSMUA_Achr6P06990_001	Banana	mitochondrion, nucleus	16.84	38.46
Bra027283.1-P	Field mustard	nucleus	20.98	37.67
CDX97628	Canola	nucleus	20.98	37.5
CDY68595	Canola	nucleus	20.98	37.5
CDY32323	Canola	nucleus	19.69	36.72
Bra001580.1-P	Field mustard	nucleus	20.73	35.56
CDX82452	Canola	nucleus	20.73	35.56
Bra021587.1-P	Field mustard	nucleus	20.21	35.45
CDY20098	Canola	nucleus	18.65	34.95
CDX75803	Canola	nucleus	21.24	34.75
AT3G15040.1	Thale cress	nucleus	21.5	34.16
EER94255	Sorghum	mitochondrion, nucleus	20.98	33.61
Zm00001d032976_P001	Maize	mitochondrion, nucleus	21.5	32.81
Solyc09g010140.1.1	Tomato	cytosol	20.21	32.5
OQU81531	Sorghum	nucleus	20.73	31.75
Zm00001d003775_P001	Maize	cytosol, mitochondrion, nucleus	20.21	31.45
Os04t0413900-01	Rice	nucleus	19.95	31.43
Solyc03g082610.1.1	Tomato	plastid	16.84	31.4
TraesCS2B01G312200.1	Wheat	nucleus	19.17	31.36
Solyc06g075170.1.1	Tomato	nucleus	13.21	31.29
TraesCS2A01G295700.1	Wheat	nucleus	18.91	30.93
TraesCS2D01G293600.1	Wheat	nucleus	19.17	30.83
Solyc11g069450.1.1	Tomato	cytosol	13.73	30.64
Solyc10g086110.1.1	Tomato	cytosol	12.44	30.38
Solyc02g080510.1.1	Tomato	mitochondrion	13.99	26.21
Solyc02g032800.1.1	Tomato	nucleus	14.51	26.05
Solyc09g007790.1.1	Tomato	cytosol	10.62	25.95
Solyc07g064650.1.1	Tomato	nucleus	11.92	25.84
Solyc02g080580.1.1	Tomato	nucleus	9.59	23.87

Protein Annotations

EnsemblPlants:Solyc06g074260.2.1	EnsemblPlantsGene:Solyc06g074260.2	InterPro:Senescence_reg_S40	PANTHER:PTHR33083	PANTHER:PTHR33083:SF5	PFAM:PF04520
SEG:seg	UniParc:UPI00027663C0	UniProt:K4C9E4	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6:-:45905590..45912547

Molecular Weight (calculated)

41656.2 Da

IEP (calculated)

8.086

GRAVY (calculated)

-0.361

Length

386 amino acids

Sequence
(BLAST)

001: MDSGGGGPNN SRYQRKLPSS DRFLGIFSTA HSQSQPSAST SAAEVELSEH DIFDASSDAI QHSTPSTSTS PIANYHRSPN HLSHHKHFGI LAALPESESH
101: AQALLSVSSS SSSSSTSSAR LIPTIPKRPP VDRVKYLQSA PVNVPVMSAA ARRRGRHFDD VDDDVDGGEV LPPHEIVASR KTPILASSVV EGAGRKLKGR
201: DLRQVRDAIL QKTGYMASYQ LGFPLFITLV LATLQLSSCY VLKGSVTCLD CSQHNDLSGI EVLVKCGQVK RLAMATTEED GSFETKLPST PPNKCYAKIL
301: GGPNQLFVSR IETDPNIVKS QEDDNSYTIS NPLKFYTKCP SPNKSAKGKC HDEFGSSKTI DLPLPKEWGI APTSYYVPVL PIIGIP

Best Arabidopsis Sequence Match ( AT5G22430.1 )
(BLAST)

001: MANQAAAAAF FLFALAVFSN LELSASSLVS GKISCLDCHR DFDFSGIKVL LKCDGEKKQI TAVAAADGSF RSVLPTADKK GSINCLAKLL GGPEQLYAHK
101: HNLVSELVKS KHDSKVLTTS NPLAFSLSCP KPSRDDIGSM IGDSKTINFP GAGGFGFPPA SFFPFLPIIG IP

Arabidopsis Description

Pollen Ole e 1 allergen and extensin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.