Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G312200.1 | Wheat | nucleus | 78.78 | 81.78 |
| TraesCS2D01G293600.1 | Wheat | nucleus | 79.59 | 81.25 |
| TraesCS2A01G295700.1 | Wheat | nucleus | 77.96 | 80.93 |
| Zm00001d003775_P001 | Maize | cytosol, mitochondrion, nucleus | 79.18 | 78.23 |
| OQU81531 | Sorghum | nucleus | 80.0 | 77.78 |
| VIT_06s0080g00750.t01 | Wine grape | cytosol | 14.69 | 72.0 |
| Solyc10g083260.1.1 | Tomato | nucleus | 15.92 | 52.7 |
| GSMUA_Achr6P06990_001 | Banana | mitochondrion, nucleus | 33.88 | 49.11 |
| Os01t0862600-01 | Rice | nucleus | 37.96 | 42.47 |
| Os11t0154300-01 | Rice | cytosol, mitochondrion, plastid | 29.39 | 42.11 |
| KRH67951 | Soybean | cytosol, plastid | 33.47 | 37.61 |
| KRH30402 | Soybean | nucleus | 35.51 | 37.34 |
| Os04t0542000-01 | Rice | cytosol, nucleus, plastid | 31.84 | 37.32 |
| CDY32323 | Canola | nucleus | 31.02 | 36.72 |
| PGSC0003DMT400015061 | Potato | cytosol, mitochondrion, nucleus, plastid | 33.06 | 36.49 |
| Os03t0113900-02 | Rice | cytosol, mitochondrion, plastid | 28.57 | 35.53 |
| PGSC0003DMT400023089 | Potato | cytosol | 34.69 | 35.42 |
| KRH22667 | Soybean | nucleus | 35.51 | 35.37 |
| PGSC0003DMT400072600 | Potato | nucleus | 34.69 | 35.27 |
| CDX97628 | Canola | nucleus | 31.02 | 35.19 |
| KRH26654 | Soybean | cytosol | 34.69 | 35.12 |
| Bra021587.1-P | Field mustard | nucleus | 31.43 | 35.0 |
| Solyc09g010140.1.1 | Tomato | cytosol | 34.29 | 35.0 |
| Bra027283.1-P | Field mustard | nucleus | 30.61 | 34.88 |
| VIT_08s0007g02950.t01 | Wine grape | nucleus | 31.02 | 34.86 |
| Bra001580.1-P | Field mustard | nucleus | 31.84 | 34.67 |
| CDX82452 | Canola | nucleus | 31.84 | 34.67 |
| CDY20098 | Canola | nucleus | 28.98 | 34.47 |
| CDY68595 | Canola | nucleus | 30.2 | 34.26 |
| CDX75803 | Canola | nucleus | 32.24 | 33.47 |
| KRH25262 | Soybean | nucleus | 31.84 | 32.23 |
| AT3G15040.1 | Thale cress | nucleus | 31.84 | 32.1 |
| KRG96207 | Soybean | plastid | 33.06 | 30.45 |
| Os02t0629000-01 | Rice | mitochondrion | 20.82 | 30.0 |
| Os04t0520700-01 | Rice | mitochondrion | 20.82 | 29.31 |
| Os07t0516300-01 | Rice | mitochondrion | 22.04 | 27.55 |
| Solyc06g074260.2.1 | Tomato | cytosol | 31.43 | 19.95 |
| Os12t0156000-00 | Rice | nucleus | 22.04 | 19.15 |
| Os10t0481000-00 | Rice | mitochondrion | 19.59 | 16.05 |
Protein Annotations
| EnsemblPlants:Os04t0413900-01 | EnsemblPlantsGene:Os04g0413900 | EntrezGene:4335793 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF15 |
| PFAM:PF04520 | ProteinID:BAF14664.1 | ProteinID:BAS89138.1 | ProteinID:CAD40587.2 | ProteinID:EAZ30684.1 | RefSeq:XP_015633737.1 |
| SEG:seg | UniParc:UPI00001B0FDB | UniProt:Q7XVJ5 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF584 family protein. (Os04t0413900-01)
Coordinates
chr4:+:20443290..20444608
Molecular Weight (calculated)
25242.7 Da
IEP (calculated)
10.573
GRAVY (calculated)
-0.433
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEYRPRRSP ASERFIGMFA SPSSSPTEPS FVAGDELHED DFLFSSSPAA PPSSARPGEG PGSPSRVPQG QVGLLAALHE GDKRLLLRRG GGGGGGAAAA
101: AAASAGTLLR RKATIAAAAA SASGGGGSLS PTQSPTSAAR AIPMTPRPKS AGPAAPYHQS APVKVPVRPP RRQEMFKWDE LDDDDFLRNG DAAMLPPHEM
201: VARASAGGAG PAAPFSMLEG AGRTLKGRDL RRVRDAVLRQ TGFLD
101: AAASAGTLLR RKATIAAAAA SASGGGGSLS PTQSPTSAAR AIPMTPRPKS AGPAAPYHQS APVKVPVRPP RRQEMFKWDE LDDDDFLRNG DAAMLPPHEM
201: VARASAGGAG PAAPFSMLEG AGRTLKGRDL RRVRDAVLRQ TGFLD
001: MNKNPRLDFS SPSSLATISD SADGELNEDD IFAIDISHAP PQARHSPVSS PAKQQTPARQ LQRSKSGLKN VEASGILAAL PESSGSSSYL SHVFHHKPAA
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID
101: ALSTSVSSTA SSSSSSGGGA SAGSSSSARA IPTAPKPPQE RLPFSASFVG GGKYPQSAPV QVPLVSSAMM NRHKKEFKLT DVVDDDEEEE EGEMLPPHEI
201: VARSLAQSSL LSCSVLEGAG RTLKGRDLRQ VRNAVFRRTG FID
Arabidopsis Description
At3g15040 [Source:UniProtKB/TrEMBL;Acc:Q9LKA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.