Factsheet for Os02t0656300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0823300-00
Os01t0873100-01
Os02t0639900-01
Os02t0785900-00
Os03t0206900-01
Os03t0236966-00
Os03t0244950-00
Os03t0816200-01
Os04t0484800-01
Os04t0485000-01
Os04t0530600-01
Os04t0589200-01
Os04t0626900-01
Os05t0430800-01
Os05t0477300-03
Os06t0716100-01
Os07t0264800-01
Os08t0426866-00
Os08t0548400-00
Os08t0556600-01
Os08t0560900-01
Os09t0513700-01
Os11t0217300-01
Os12t0580700-01
Os12t0626300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48150.1	Os08t0560900-01	AT1G03130.1	21798944
AT3G48150.1	Os12t0626300-01	AT1G06590.1	20706207
AT3G48150.1	Os03t0206900-01	AT1G49850.1	21798944
AT3G48150.1	Os12t0580700-01	AT1G49850.1	21798944
AT3G48150.1	Os07t0264800-01	AT1G72030.1	21798944
AT3G48150.1	Os03t0236966-00	AT1G78770.1	20706207
AT3G48150.1	Os04t0484800-01	AT2G04660.1	14508008
AT3G48150.1	Os11t0217300-01	AT2G05830.1	20706207
AT3G48150.1	Os03t0244950-00	AT2G17880.1	21798944
AT3G48150.1	Os06t0716100-01	AT2G17880.1	21798944
AT3G48150.1	Os08t0548400-00	AT2G17880.1	21798944
AT3G48150.1	Os01t0823300-00	AT2G40590.1	21798944
AT3G48150.1	Os03t0816200-01	AT2G40590.1	21798944
AT3G48150.1	Os05t0477300-03	AT2G40590.1	21798944
AT3G48150.1	Os09t0513700-01	AT2G43370.1	21798944
AT3G48150.1	Os04t0626900-01	AT3G15160.1	21798944
AT3G48150.1	Os02t0639900-01	AT3G15360.1	21798944
AT3G48150.1	Os04t0530600-01	AT3G15360.1	21798944
AT3G48150.1	Os04t0589200-01	AT3G17668.1	21798944
AT3G48150.1	Os08t0556600-01	AT3G62790.1	21798944
AT3G48150.1	Os02t0785900-00	AT4G21530.1	20706207
AT3G48150.1	Os04t0485000-01	AT4G24820.1	20706207
AT3G48150.1	Os01t0873100-01	AT4G34740.1	21798944
AT3G48150.1	Os05t0430800-01	AT4G34740.1	21798944
AT3G48150.1	Os08t0426866-00	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G273900.1	Wheat	cytosol	92.13	91.82
TraesCS6A01G251400.1	Wheat	cytosol	91.79	91.49
TraesCS6D01G233200.1	Wheat	cytosol	91.46	91.15
Zm00001d017475_P002	Maize	cytosol	88.27	87.98
EES07517	Sorghum	cytosol	87.44	87.0
HORVU6Hr1G062870.1	Barley	cytosol, plastid	90.12	82.9
HORVU0Hr1G027080.4	Barley	plastid	82.24	81.83
Os06t0679100-00	Rice	plastid	21.78	73.03
VIT_07s0130g00490.t01	Wine grape	cytosol	69.01	71.4
GSMUA_Achr11P...	Banana	cytosol	72.19	71.36
VIT_07s0031g02330.t01	Wine grape	cytosol	67.84	70.19
KRH27971	Soybean	nucleus	66.67	68.98
KRH77487	Soybean	nucleus	66.33	68.51
Solyc03g113740.2.1	Tomato	cytosol, mitochondrion	65.16	67.53
PGSC0003DMT400063189	Potato	cytosol	61.14	67.1
Bra033769.1-P	Field mustard	nucleus	63.32	65.4
KRH24006	Soybean	cytosol	64.15	65.03
AT3G48150.1	Thale cress	cytosol	62.98	64.94
Bra018081.1-P	Field mustard	cytosol	62.48	64.42
CDY58070	Canola	cytosol	51.76	62.42
CDY70805	Canola	nucleus	31.16	61.79
CDY44976	Canola	cytosol	51.59	60.99
CDY36901	Canola	cytosol	50.42	60.08
CDY58069	Canola	nucleus	42.38	56.73
KRH29310	Soybean	cytosol	26.47	49.38
Os06t0622500-00	Rice	cytosol	13.74	21.58

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.3.4.1.1.2.4	EntrezGene:4330199	InterPro:APC8	ProteinID:BAD25679.1	ProteinID:BAF09538.1
ProteinID:BAS80100.1	ncoils:Coil	ProteinID:EEE57507.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005680	GO:GO:0007049
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0030071	GO:GO:0051301	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlantsGene:Os02g0656300	EnsemblPlants:Os02t0656300-01	PFAM:PF04049	PFAM:PF13181
PFAM:PF13414	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR12558	PANTHER:PTHR12558:SF10	UniProt:Q6H6H0
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00003B450D
RefSeq:XP_015622608.1	SEG:seg	:	:	:	:

Description

ANAPHASE PROMOTING COMPLEX 8Similar to Anaphase-promoting complex subunit 8-like protein. (Os02t0656300-01)

Coordinates

chr2:+:26511108..26515513

Molecular Weight (calculated)

68069.0 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.383

Length

597 amino acids

Sequence
(BLAST)

001: MASSNETYRV ELRAAARQLG ERGLYSAAKW AAELLVGIEP DATPAPSSVM DTPSSSGSAA SGGRLLHLHR SGGSSFRRRL RPGAAEAGTP LGGVSYVSTP
101: IPDDDAFDVG GDRYLLAKTY FDCREYRRAA HVLRGQTGRK AVFLRCYALY TAGEKRKEEE TVELEGSLGK SNAVNQELVA LERELATHRR TGAIDSFCLY
201: LYGIVLRDKG SEALARTVLV ESVNSYPWNW SAWLELQSLC TSSDILNNLN IKNHWMKDFF LASAHLELKM HEEALKRYER LMGVFRCSDY IQAQIATVQY
301: SMRDLDEADM IFEELLRTDP FRVDSMDVYS NLLYAKESST ALSFLAHRVF LTDKYRPESC CIIANYYSLK GQHEKSVLYF QRALKLNRKY LSAWTLMGHE
401: FVELKNTPAA IDAYRRAVDI NPRDYRAWYG LGQIYEMMGM PFYAVYYFRK SSYLQPNDAR LWNAMAQCYE SDQLQMIEEA IKCYERSANN NDTEGIALHQ
501: LAKLHGMLGQ SEEAAFYYKK DLERMEVEER QGQNFVEALL FLAKHCKSIG RFEEAEHYCT RLLDYTGPER ETAKSILQGL KRAQSVLPLM DIDHFAM

Best Arabidopsis Sequence Match ( AT3G48150.1 )
(BLAST)

001: MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI

Arabidopsis Description

APC8Anaphase-promoting complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.