Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0747400-01 | |
| Os06t0226700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34740.1 | Os02t0747400-01 | AT3G47620.1 | 21798944 |
| AT4G34740.1 | Os06t0226700-01 | AT3G47620.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042673_P001 | Maize | plastid | 94.29 | 18.2 |
| OQU87957 | Sorghum | plastid | 92.38 | 17.73 |
| Os05t0430800-01 | Rice | plastid | 83.81 | 16.27 |
| TraesCS3B01G415900.1 | Wheat | plastid | 76.19 | 14.68 |
| GSMUA_Achr3P22240_001 | Banana | cytosol | 61.9 | 14.51 |
| TraesCS3A01G383500.1 | Wheat | plastid | 75.24 | 14.36 |
| TraesCS3D01G376600.1 | Wheat | plastid | 73.33 | 14.05 |
| GSMUA_Achr4P16330_001 | Banana | cytosol | 62.86 | 13.44 |
| HORVU3Hr1G082280.1 | Barley | plastid | 77.14 | 13.17 |
| CDY41949 | Canola | cytosol | 53.33 | 11.64 |
| GSMUA_AchrUn_... | Banana | plastid | 59.05 | 11.57 |
| CDY42591 | Canola | cytosol | 52.38 | 11.36 |
| KRH39819 | Soybean | plastid | 54.29 | 11.15 |
| KRH24354 | Soybean | nucleus, plastid | 58.1 | 10.78 |
| AT4G38880.1 | Thale cress | plastid | 54.29 | 10.71 |
| KRH39820 | Soybean | nucleus, plastid | 58.1 | 10.65 |
| Bra011558.1-P | Field mustard | plastid | 56.19 | 10.63 |
| KRH60750 | Soybean | extracellular, plastid | 57.14 | 10.54 |
| AT4G34740.1 | Thale cress | plastid | 56.19 | 10.52 |
| Solyc01g088360.2.1 | Tomato | plastid | 54.29 | 10.34 |
| Bra001980.1-P | Field mustard | plastid | 54.29 | 10.23 |
| CDY46205 | Canola | plastid | 54.29 | 10.22 |
| VIT_03s0038g00880.t01 | Wine grape | plastid | 56.19 | 10.14 |
| Bra011888.1-P | Field mustard | plastid | 52.38 | 10.13 |
| PGSC0003DMT400089372 | Potato | plastid | 53.33 | 10.11 |
| AT2G16570.1 | Thale cress | plastid | 54.29 | 10.07 |
| Solyc01g110520.2.1 | Tomato | nucleus, plastid | 55.24 | 10.05 |
| PGSC0003DMT400004095 | Potato | plastid | 55.24 | 9.98 |
| CDY61829 | Canola | cytosol, plastid | 53.33 | 9.23 |
| CDX75458 | Canola | plastid | 56.19 | 7.63 |
| Bra011557.1-P | Field mustard | plastid | 9.52 | 4.65 |
| KRH24353 | Soybean | cytosol, plastid | 2.86 | 2.38 |
| CDY45330 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0873100-01 | EnsemblPlantsGene:Os01g0873100 | Gene3D:3.40.50.2020 | InterPro:PRTase-like | PANTHER:PTHR11907 | PANTHER:PTHR11907:SF14 |
| ProteinID:BAF06865.1 | ProteinID:BAS75476.1 | SEG:seg | SUPFAM:SSF53271 | UniParc:UPI0000DD8E29 | UniProt:Q0JHB3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Similar to Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT). (Os01t0873100-01)
Coordinates
chr1:-:37866113..37866722
Molecular Weight (calculated)
11540.8 Da
IEP (calculated)
4.534
GRAVY (calculated)
-0.006
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: KIVRLLRDAG AREVHMRIAS PPVIGSCLYG IDTPSEGELI SNRMDLEGVR RAIGCDSLAF LSLDKLHTIY GDEAHELCDA CFSRNYPVLP TVPEPVPELV
101: SAFED
101: SAFED
001: MAATSSISSS LSLNAKPNKL SNNNNNNKPH RFLRNPFLNP SSSSFSPLPA SISSSSSSPS FPLRVSNPLT LLAADNDDYD EKPREECGVV GIYGDSEASR
101: LCYLALHALQ HRGQEGAGIV TVSKDKVLQT ITGVGLVSEV FSESKLDQLP GDIAIGHVRY STAGSSMLKN VQPFVAGYRF GSVGVAHNGN LVNYTKLRAD
201: LEENGSIFNT SSDTEVVLHL IAISKARPFF MRIVDACEKL QGAYSMVFVT EDKLVAVRDP HGFRPLVMGR RSNGAVVFAS ETCALDLIEA TYEREVYPGE
301: VLVVDKDGVK CQCLMPHPEP KQCIFEHIYF SLPNSIVFGR SVYESRHVFG EILATESPVD CDVVIAVPDS GVVAALGYAA KAGVAFQQGL IRSHYVGRTF
401: IEPSQKIRDF GVKLKLSPVR GVLEGKRVVV VDDSIVRGTT SSKIVRLLRE AGAKEVHMRI ASPPIIASCY YGVDTPSSNE LISNRMSVDE IRDYIGCDSL
501: AFLSFETLKK HLGEDSRSFC YACFTGDYPV KPTEDKVKRG GDFIDDGLVG GIHNIEGGWV R
101: LCYLALHALQ HRGQEGAGIV TVSKDKVLQT ITGVGLVSEV FSESKLDQLP GDIAIGHVRY STAGSSMLKN VQPFVAGYRF GSVGVAHNGN LVNYTKLRAD
201: LEENGSIFNT SSDTEVVLHL IAISKARPFF MRIVDACEKL QGAYSMVFVT EDKLVAVRDP HGFRPLVMGR RSNGAVVFAS ETCALDLIEA TYEREVYPGE
301: VLVVDKDGVK CQCLMPHPEP KQCIFEHIYF SLPNSIVFGR SVYESRHVFG EILATESPVD CDVVIAVPDS GVVAALGYAA KAGVAFQQGL IRSHYVGRTF
401: IEPSQKIRDF GVKLKLSPVR GVLEGKRVVV VDDSIVRGTT SSKIVRLLRE AGAKEVHMRI ASPPIIASCY YGVDTPSSNE LISNRMSVDE IRDYIGCDSL
501: AFLSFETLKK HLGEDSRSFC YACFTGDYPV KPTEDKVKRG GDFIDDGLVG GIHNIEGGWV R
Arabidopsis Description
ASE2Amidophosphoribosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UYQ3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.