CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46205	Canola	plastid	57.4	17.38
CDY61829	Canola	cytosol, plastid	55.62	15.49
CDY42591	Canola	cytosol	43.2	15.08
GSMUA_Achr3P22240_001	Banana	cytosol	39.65	14.96
CDY41949	Canola	cytosol	42.01	14.76
GSMUA_Achr4P16330_001	Banana	cytosol	40.83	14.05
GSMUA_AchrUn_...	Banana	plastid	42.6	13.43
CDX75458	Canola	plastid	59.76	13.07
Zm00001d010197_P001	Maize	plastid	40.83	12.78
Os05t0430800-01	Rice	plastid	40.83	12.75
EES18281	Sorghum	plastid	40.24	12.52
TraesCS1A01G269300.1	Wheat	plastid	40.24	12.43
Zm00001d038332_P001	Maize	plastid	39.05	12.15
TraesCS1D01G269400.1	Wheat	plastid	39.05	12.11
TraesCS1B01G279800.1	Wheat	plastid	39.05	12.07
TraesCS3B01G415900.1	Wheat	plastid	37.87	11.74
HORVU1Hr1G074460.2	Barley	plastid	39.05	11.7
TraesCS3D01G376600.1	Wheat	plastid	37.87	11.68
TraesCS3A01G383500.1	Wheat	plastid	37.28	11.45
Zm00001d042673_P001	Maize	plastid	36.69	11.4
OQU87957	Sorghum	plastid	36.69	11.33
HORVU3Hr1G082280.1	Barley	plastid	37.28	10.24
Os01t0873100-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY45330	EnsemblPlantsGene:GSBRNA2T00081796001	Gene3D:3.60.20.10	InterPro:GATase_2_dom	InterPro:IPR017932	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	InterPro:Put_GATase_2	PANTHER:PTHR11907	PANTHER:PTHR11907:SF0	PFAM:PF13230	PFscan:PS51278
ProteinID:CDY45330	ProteinID:CDY45330.1	SEG:seg	SUPFAM:SSF56235	UniParc:UPI0004EF2269	UniProt:A0A078I377
MapMan:35.1	:	:	:	:	:

Description

BnaA03g53030DBnaA03g53030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I377]

Coordinates

chrLK032620:-:195969..197366

Molecular Weight (calculated)

18835.0 Da

IEP (calculated)

10.325

GRAVY (calculated)

-0.053

Length

169 amino acids

Sequence
(BLAST)

001: MYLKNKFFWR CPQILHHGGH FHLLTLPLLN TNPNKLSKPL RNPIHLFPLH SLNRYLALHA LQHRGQEGAG CIVTVSKDKV LQTIIGVGLV SEVLNESKLD
101: QLPGDIAIGH VRYSTAGSSL LKNVQPFVPG YRFGSVGVAH NGNLVNYTKL SQCNAFSNTF TSRYTFSML

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.