CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88112
EES07255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	EER88112	AT3G47620.1	21798944
AT4G34740.1	EES07255	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010197_P001	Maize	plastid	93.19	93.7
Zm00001d038332_P001	Maize	plastid	92.63	92.63
Os05t0430800-01	Rice	plastid	87.48	87.8
TraesCS1A01G269300.1	Wheat	plastid	86.56	85.92
TraesCS1D01G269400.1	Wheat	plastid	85.64	85.32
TraesCS1B01G279800.1	Wheat	plastid	85.82	85.19
HORVU1Hr1G074460.2	Barley	plastid	86.0	82.8
OQU87957	Sorghum	plastid	80.85	80.26
GSMUA_Achr3P22240_001	Banana	cytosol	58.56	70.98
GSMUA_Achr4P16330_001	Banana	cytosol	62.62	69.25
GSMUA_AchrUn_...	Banana	plastid	61.51	62.31
CDY41949	Canola	cytosol	52.12	58.84
KRH39819	Soybean	plastid	55.25	58.71
Bra001980.1-P	Field mustard	plastid	60.04	58.53
CDY42591	Canola	cytosol	51.93	58.26
Bra011558.1-P	Field mustard	plastid	58.75	57.48
KRH60750	Soybean	extracellular, plastid	60.04	57.29
AT4G34740.1	Thale cress	plastid	58.93	57.04
CDY46205	Canola	plastid	58.38	56.81
AT2G16570.1	Thale cress	plastid	58.93	56.54
KRH24354	Soybean	nucleus, plastid	58.75	56.36
Solyc01g110520.2.1	Tomato	nucleus, plastid	58.56	55.11
VIT_03s0038g00880.t01	Wine grape	plastid	58.93	54.98
KRH39820	Soybean	nucleus, plastid	57.83	54.8
KRH24353	Soybean	cytosol, plastid	12.71	54.76
PGSC0003DMT400004095	Potato	plastid	58.56	54.73
AT4G38880.1	Thale cress	plastid	53.59	54.7
PGSC0003DMT400089372	Potato	plastid	55.06	53.97
Solyc01g088360.2.1	Tomato	plastid	54.51	53.72
Bra011888.1-P	Field mustard	plastid	53.41	53.41
CDY61829	Canola	cytosol, plastid	59.3	53.05
CDX75458	Canola	plastid	60.59	42.56
CDY45330	Canola	mitochondrion	12.52	40.24
Bra011557.1-P	Field mustard	plastid	11.05	27.91

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1	EntrezGene:8058504
UniProt:C5YYD1	EnsemblPlants:EES18281	ProteinID:EES18281	ProteinID:EES18281.1	InterPro:GATase_2_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004044	GO:GO:0005488	GO:GO:0006139	GO:GO:0006164	GO:GO:0006189
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009113	GO:GO:0009116	GO:GO:0009987
GO:GO:0016740	GO:GO:0016757	GO:GO:0046872	GO:GO:0051536	InterPro:IPR017932	InterPro:IPR029055
HAMAP:MF_01931	InterPro:Ntn_hydrolases_N	PFAM:PF13537	PIRSF:PIRSF000485	InterPro:PRTase-like	InterPro:PRibTrfase_dom
PFscan:PS51278	PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	MetaCyc:PWY-6121	MetaCyc:PWY-6122	MetaCyc:PWY-6277
MetaCyc:PWY-7282	InterPro:PurF	InterPro:PurF_N	EnsemblPlantsGene:SORBI_3009G148700	SUPFAM:SSF53271	SUPFAM:SSF56235
unigene:Sbi.20568	TIGRFAMs:TIGR01134	UniParc:UPI0001A887FD	RefSeq:XP_002439851.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:50593089..50594805

Molecular Weight (calculated)

58260.5 Da

IEP (calculated)

7.264

GRAVY (calculated)

-0.025

Length

543 amino acids

Sequence
(BLAST)

001: MGIAAAAATT TTSRLLHYHA AAGTDRHHRH QLRYSASPFP LSLRCGSGRR EAAAARALLP DRVTPFSYGV DEDADDHPRE ECGLVGVVGD PDAASLCYLG
101: LQKLQHRGEE GAGIVAVGGD GKLKSVTGLG LVADVFGDPS RLASLPGPAA IGHVRYSTAG AAASLRNVQP FLAGYRFGQV AVAHNGNLVN YQALRNKLEA
201: RGSIFNTSSD TEVILHLIAT SLSRPLLARV CDACERLAGA YSLLFLTADK LFAVRDPHGF RPLVMGRRRN GAVVFASETC ALDLIDATYE REVQPGEVVV
301: VDRRDMSVAS ACLVPHRPRR SCVFEHIYFA LPNSVVFSHA VHERRTAFGQ ALAEESPAPG ADVVIPVPDS GFYAALGFAR ASGLEFQQGL IRWHYSGRSF
401: IQPTQAIRDL AVKLKLAPVR GVITGKSVVV VDDSLVRGTT SSKIVRLLRD AGAREVHMRI ASPPVVGSCL YGIDTPSEGE LISNRMDLDG VRREIGSDSL
501: AFLSLDKLHS IYGEESGDYC DACFSRKYPV LPTLADPAVE PDE

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.